Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ATP4AP20648 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ATP4AP20648 AL596211.1-201ENST00000569873 2277 ntBASIC3.4□□□□□ -1.87
ATP4AP20648 ZNF720P1-201ENST00000562403 1939 ntBASIC3.39□□□□□ -1.87
ATP4AP20648 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATP4AP20648 MIR590-201ENST00000385008 97 ntBASIC3.39□□□□□ -1.87
ATP4AP20648 FTH1P12-201ENST00000432137 551 ntBASIC3.39□□□□□ -1.87
ATP4AP20648 SNORA48.11-201ENST00000517015 89 ntBASIC3.39□□□□□ -1.87
ATP4AP20648 AP002004.2-201ENST00000531656 154 ntBASIC3.39□□□□□ -1.87
ATP4AP20648 AL442128.1-201ENST00000615151 90 ntBASIC3.39□□□□□ -1.87
ATP4AP20648 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATP4AP20648 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATP4AP20648 RNU6-442P-201ENST00000383968 104 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 MIR95-201ENST00000385072 81 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 RN7SL20P-201ENST00000488827 297 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 SCARNA13-201ENST00000516672 275 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.38□□□□□ -1.87
ATP4AP20648 AC141557.1-201ENST00000540982 400 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 AC091544.4-201ENST00000555268 342 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 AL353149.1-201ENST00000610667 244 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 AC007318.2-201ENST00000620999 243 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 AC006386.2-201ENST00000624491 75 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 AC012005.1-201ENST00000624575 75 ntBASIC3.38□□□□□ -1.87
ATP4AP20648 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ATP4AP20648 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.38□□□□□ -1.87
ATP4AP20648 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.37□□□□□ -1.87
ATP4AP20648 AC093831.2-201ENST00000624393 3427 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATP4AP20648 MIR340-201ENST00000362125 95 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 RNU1-23P-201ENST00000363361 144 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 SNORD14E-201ENST00000364009 85 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 RNY1P6-201ENST00000384193 109 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 MIR522-201ENST00000385071 87 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 U8.17-201ENST00000391292 132 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 AL139132.1-201ENST00000431587 344 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 AL353689.1-201ENST00000438895 199 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.37□□□□□ -1.87
ATP4AP20648 RNU7-94P-201ENST00000459576 63 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 RNU6-830P-201ENST00000516353 107 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 RNU6-109P-201ENST00000516364 107 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 RNU6-184P-201ENST00000516514 107 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 RNU1-142P-201ENST00000516682 145 ntBASIC3.37□□□□□ -1.87
ATP4AP20648 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATP4AP20648 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.37□□□□□ -1.87
ATP4AP20648 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATP4AP20648 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATP4AP20648 Y_RNA.298-201ENST00000364960 107 ntBASIC3.36□□□□□ -1.87
ATP4AP20648 RNU6-1328P-201ENST00000410938 106 ntBASIC3.36□□□□□ -1.87
ATP4AP20648 AL049830.1-201ENST00000468034 425 ntBASIC3.36□□□□□ -1.87
ATP4AP20648 AC084364.2-201ENST00000546924 395 ntBASIC3.36□□□□□ -1.87
ATP4AP20648 AL356280.1-201ENST00000603614 379 ntBASIC3.36□□□□□ -1.87
ATP4AP20648 AC006441.5-201ENST00000612680 209 ntBASIC3.36□□□□□ -1.87
ATP4AP20648 MIR7515-201ENST00000637837 67 ntBASIC3.36□□□□□ -1.87
ATP4AP20648 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ATP4AP20648 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ATP4AP20648 AC093010.3-201ENST00000570269 15214 ntBASIC3.36□□□□□ -1.87
ATP4AP20648 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATP4AP20648 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATP4AP20648 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.35□□□□□ -1.87
ATP4AP20648 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATP4AP20648 RNU6-349P-201ENST00000362402 107 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 SNORD115-28-201ENST00000363931 81 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 RNU1-133P-201ENST00000364867 167 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 MIR515-2-201ENST00000384883 83 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 MIR515-1-201ENST00000384884 83 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 MIR548D2-201ENST00000384955 97 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 RNA5SP323-201ENST00000391094 133 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 RNA5SP467-201ENST00000391274 118 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 RNU2-63P-201ENST00000410792 194 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 MTATP8P2-201ENST00000435212 202 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 AC107083.1-201ENST00000439643 279 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 SUMO2P16-201ENST00000519475 264 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.35□□□□□ -1.87
ATP4AP20648 MIR3163-201ENST00000581592 73 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 AC062037.1-201ENST00000605302 128 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.35□□□□□ -1.87
ATP4AP20648 AL137790.1-201ENST00000634283 177 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 MIR338-201ENST00000636369 67 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATP4AP20648 AC092435.3-201ENST00000565538 3654 ntBASIC3.35□□□□□ -1.87
ATP4AP20648 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATP4AP20648 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATP4AP20648 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATP4AP20648 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATP4AP20648 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.34□□□□□ -1.87
ATP4AP20648 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.34□□□□□ -1.87
ATP4AP20648 SNORA1B-201ENST00000362535 133 ntBASIC3.34□□□□□ -1.87
ATP4AP20648 COTL1P1-201ENST00000422309 375 ntBASIC3.34□□□□□ -1.87
ATP4AP20648 AC099677.2-201ENST00000436385 175 ntBASIC3.34□□□□□ -1.87
ATP4AP20648 RNU7-164P-201ENST00000459221 62 ntBASIC3.34□□□□□ -1.87
ATP4AP20648 RPS29P12-201ENST00000460178 152 ntBASIC3.34□□□□□ -1.87
ATP4AP20648 RNU6-904P-201ENST00000516206 101 ntBASIC3.34□□□□□ -1.87
ATP4AP20648 RNU6-1041P-201ENST00000516254 102 ntBASIC3.34□□□□□ -1.87
ATP4AP20648 RNU7-25P-201ENST00000516544 62 ntBASIC3.34□□□□□ -1.87
ATP4AP20648 SNORD115-40-201ENST00000606510 82 ntBASIC3.34□□□□□ -1.87
ATP4AP20648 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATP4AP20648 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.34□□□□□ -1.88
ATP4AP20648 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms