Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 Z83843.1-201ENST00000604070 3685 ntBASIC4.38□□□□□ -1.71
CD44P16070 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD44P16070 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CD44P16070 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD44P16070 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CD44P16070 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
CD44P16070 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CD44P16070 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.37□□□□□ -1.71
CD44P16070 RNA5SP130-201ENST00000364431 114 ntBASIC4.37□□□□□ -1.71
CD44P16070 Y_RNA.371-201ENST00000365591 113 ntBASIC4.37□□□□□ -1.71
CD44P16070 RNU1-89P-201ENST00000384592 164 ntBASIC4.37□□□□□ -1.71
CD44P16070 SNORD28B-201ENST00000390993 75 ntBASIC4.37□□□□□ -1.71
CD44P16070 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CD44P16070 RNU6ATAC33P-201ENST00000408647 126 ntBASIC4.37□□□□□ -1.71
CD44P16070 AC016397.1-201ENST00000412463 242 ntBASIC4.37□□□□□ -1.71
CD44P16070 RPL23AP6-201ENST00000446637 472 ntBASIC4.37□□□□□ -1.71
CD44P16070 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.37□□□□□ -1.71
CD44P16070 AL591424.2-201ENST00000617023 128 ntBASIC4.37□□□□□ -1.71
CD44P16070 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CD44P16070 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD44P16070 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD44P16070 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD44P16070 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.36□□□□□ -1.71
CD44P16070 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.36□□□□□ -1.71
CD44P16070 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.36□□□□□ -1.71
CD44P16070 MIRLET7F1-201ENST00000362202 87 ntBASIC4.36□□□□□ -1.71
CD44P16070 Y_RNA.42-201ENST00000362660 108 ntBASIC4.36□□□□□ -1.71
CD44P16070 MIR937-201ENST00000401271 86 ntBASIC4.36□□□□□ -1.71
CD44P16070 RNU2-48P-201ENST00000410694 191 ntBASIC4.36□□□□□ -1.71
CD44P16070 AC093850.1-201ENST00000454121 251 ntBASIC4.36□□□□□ -1.71
CD44P16070 AP000873.1-201ENST00000463987 400 ntBASIC4.36□□□□□ -1.71
CD44P16070 RN7SL860P-201ENST00000473738 223 ntBASIC4.36□□□□□ -1.71
CD44P16070 RNA5SP143-201ENST00000516936 115 ntBASIC4.36□□□□□ -1.71
CD44P16070 MIR548AR-201ENST00000582191 57 ntBASIC4.36□□□□□ -1.71
CD44P16070 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CD44P16070 AL137790.1-201ENST00000634283 177 ntBASIC4.36□□□□□ -1.71
CD44P16070 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD44P16070 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.36□□□□□ -1.71
CD44P16070 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.36□□□□□ -1.71
CD44P16070 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD44P16070 SNORD45.1-201ENST00000363181 77 ntBASIC4.35□□□□□ -1.71
CD44P16070 RNU1-23P-201ENST00000363361 144 ntBASIC4.35□□□□□ -1.71
CD44P16070 RNU6-571P-201ENST00000384128 107 ntBASIC4.35□□□□□ -1.71
CD44P16070 RNU6-1067P-201ENST00000384752 107 ntBASIC4.35□□□□□ -1.71
CD44P16070 RNA5SP109-201ENST00000391010 116 ntBASIC4.35□□□□□ -1.71
CD44P16070 snoU13.16-201ENST00000459350 104 ntBASIC4.35□□□□□ -1.71
CD44P16070 AC091167.4-201ENST00000605079 184 ntBASIC4.35□□□□□ -1.71
CD44P16070 MIR486-1-201ENST00000612171 68 ntBASIC4.35□□□□□ -1.71
CD44P16070 MIR8054-201ENST00000620877 86 ntBASIC4.35□□□□□ -1.71
CD44P16070 LINC02471-203ENST00000641941 4752 ntBASIC4.35□□□□□ -1.71
CD44P16070 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.35□□□□□ -1.71
CD44P16070 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.35□□□□□ -1.71
CD44P16070 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD44P16070 AL161722.3-201ENST00000605789 2983 ntBASIC4.34□□□□□ -1.71
CD44P16070 SNORD36A-201ENST00000362874 73 ntBASIC4.34□□□□□ -1.71
CD44P16070 SNORD113.1-201ENST00000363280 73 ntBASIC4.34□□□□□ -1.71
CD44P16070 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CD44P16070 MIR2113-201ENST00000459007 91 ntBASIC4.34□□□□□ -1.71
CD44P16070 RPS27P21-201ENST00000486977 252 ntBASIC4.34□□□□□ -1.71
CD44P16070 RNA5SP179-201ENST00000517284 121 ntBASIC4.34□□□□□ -1.71
CD44P16070 AC007448.1-201ENST00000582714 234 ntBASIC4.34□□□□□ -1.71
CD44P16070 CR392039.5-201ENST00000623201 510 ntBASIC4.34□□□□□ -1.71
CD44P16070 Z97988.1-201ENST00000637697 135 ntBASIC4.34□□□□□ -1.71
CD44P16070 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD44P16070 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD44P16070 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CD44P16070 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD44P16070 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD44P16070 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.33□□□□□ -1.72
CD44P16070 SNORA56-201ENST00000383966 129 ntBASIC4.33□□□□□ -1.72
CD44P16070 MIR136-201ENST00000385207 82 ntBASIC4.33□□□□□ -1.72
CD44P16070 MIR767-201ENST00000390228 109 ntBASIC4.33□□□□□ -1.72
CD44P16070 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.33□□□□□ -1.72
CD44P16070 MIR4764-201ENST00000580680 88 ntBASIC4.33□□□□□ -1.72
CD44P16070 MIR3939-201ENST00000582614 106 ntBASIC4.33□□□□□ -1.72
CD44P16070 MIR4443-201ENST00000585052 53 ntBASIC4.33□□□□□ -1.72
CD44P16070 MIR6867-201ENST00000610636 67 ntBASIC4.33□□□□□ -1.72
CD44P16070 AL109933.3-201ENST00000619095 188 ntBASIC4.33□□□□□ -1.72
CD44P16070 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD44P16070 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
CD44P16070 RNU6-862P-201ENST00000362804 105 ntBASIC4.32□□□□□ -1.72
CD44P16070 SNORD114-6-201ENST00000364393 72 ntBASIC4.32□□□□□ -1.72
CD44P16070 Y_RNA.537-201ENST00000384626 109 ntBASIC4.32□□□□□ -1.72
CD44P16070 MIR518E-201ENST00000385252 88 ntBASIC4.32□□□□□ -1.72
CD44P16070 AL356095.1-201ENST00000417217 199 ntBASIC4.32□□□□□ -1.72
CD44P16070 MIR4500-201ENST00000579472 76 ntBASIC4.32□□□□□ -1.72
CD44P16070 MIR6820-201ENST00000611508 62 ntBASIC4.32□□□□□ -1.72
CD44P16070 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.32□□□□□ -1.72
CD44P16070 AC092634.7-201ENST00000621022 103 ntBASIC4.32□□□□□ -1.72
CD44P16070 MIR7641-1-201ENST00000627518 61 ntBASIC4.32□□□□□ -1.72
CD44P16070 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD44P16070 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CD44P16070 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD44P16070 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.31□□□□□ -1.72
CD44P16070 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD44P16070 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD44P16070 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.31□□□□□ -1.72
CD44P16070 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD44P16070 RNA5SP72-201ENST00000364442 117 ntBASIC4.31□□□□□ -1.72
CD44P16070 MIR452-201ENST00000385020 85 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms