Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
THBS1P07996 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
THBS1P07996 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.25□□□□□ -1.89
THBS1P07996 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
THBS1P07996 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
THBS1P07996 SNORD9-201ENST00000362566 104 ntBASIC3.24□□□□□ -1.89
THBS1P07996 SNORD38C-201ENST00000384381 69 ntBASIC3.24□□□□□ -1.89
THBS1P07996 SNORA80E-201ENST00000384744 137 ntBASIC3.24□□□□□ -1.89
THBS1P07996 MIR184-201ENST00000384962 84 ntBASIC3.24□□□□□ -1.89
THBS1P07996 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.24□□□□□ -1.89
THBS1P07996 RNU2-63P-201ENST00000410792 194 ntBASIC3.24□□□□□ -1.89
THBS1P07996 RNA5SP144-201ENST00000410846 116 ntBASIC3.24□□□□□ -1.89
THBS1P07996 RNU7-96P-201ENST00000459535 64 ntBASIC3.24□□□□□ -1.89
THBS1P07996 AC110768.1-201ENST00000509222 400 ntBASIC3.24□□□□□ -1.89
THBS1P07996 Y_RNA.705-201ENST00000516862 110 ntBASIC3.24□□□□□ -1.89
THBS1P07996 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.24□□□□□ -1.89
THBS1P07996 AC012531.4-201ENST00000616509 177 ntBASIC3.24□□□□□ -1.89
THBS1P07996 AC012314.7-201ENST00000619693 93 ntBASIC3.24□□□□□ -1.89
THBS1P07996 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.24□□□□□ -1.89
THBS1P07996 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
THBS1P07996 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
THBS1P07996 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.23□□□□□ -1.89
THBS1P07996 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
THBS1P07996 Y_RNA.221-201ENST00000364248 96 ntBASIC3.23□□□□□ -1.89
THBS1P07996 RNU6-60P-201ENST00000364792 103 ntBASIC3.23□□□□□ -1.89
THBS1P07996 Y_RNA.377-201ENST00000365644 108 ntBASIC3.23□□□□□ -1.89
THBS1P07996 AL035423.1-201ENST00000420331 213 ntBASIC3.23□□□□□ -1.89
THBS1P07996 AL109933.2-201ENST00000452651 260 ntBASIC3.23□□□□□ -1.89
THBS1P07996 RNU6-795P-201ENST00000516323 103 ntBASIC3.23□□□□□ -1.89
THBS1P07996 RNU6-711P-201ENST00000517255 106 ntBASIC3.23□□□□□ -1.89
THBS1P07996 AC019288.1-201ENST00000557918 224 ntBASIC3.23□□□□□ -1.89
THBS1P07996 MIR3199-1-201ENST00000582434 88 ntBASIC3.23□□□□□ -1.89
THBS1P07996 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.23□□□□□ -1.89
THBS1P07996 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.23□□□□□ -1.89
THBS1P07996 MIR7851-201ENST00000610611 160 ntBASIC3.23□□□□□ -1.89
THBS1P07996 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.23□□□□□ -1.89
THBS1P07996 MIR7975-201ENST00000619350 68 ntBASIC3.23□□□□□ -1.89
THBS1P07996 AC110079.1-202ENST00000635213 138 ntBASIC3.23□□□□□ -1.89
THBS1P07996 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
THBS1P07996 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
THBS1P07996 RNU4-16P-201ENST00000364737 141 ntBASIC3.22□□□□□ -1.89
THBS1P07996 MIR218-1-201ENST00000384999 110 ntBASIC3.22□□□□□ -1.89
THBS1P07996 RNU6-972P-201ENST00000391208 107 ntBASIC3.22□□□□□ -1.89
THBS1P07996 SNORA11.2-201ENST00000408318 127 ntBASIC3.22□□□□□ -1.89
THBS1P07996 CYCSP4-201ENST00000429682 331 ntBASIC3.22□□□□□ -1.89
THBS1P07996 ATP5J2P3-201ENST00000451550 258 ntBASIC3.22□□□□□ -1.89
THBS1P07996 RN7SL293P-201ENST00000481765 281 ntBASIC3.22□□□□□ -1.89
THBS1P07996 RN7SKP18-201ENST00000516005 275 ntBASIC3.22□□□□□ -1.89
THBS1P07996 RNU6-65P-201ENST00000516332 98 ntBASIC3.22□□□□□ -1.89
THBS1P07996 AC004812.1-201ENST00000540773 146 ntBASIC3.22□□□□□ -1.89
THBS1P07996 MIR4666B-201ENST00000578142 81 ntBASIC3.22□□□□□ -1.89
THBS1P07996 MIR5588-201ENST00000581890 63 ntBASIC3.22□□□□□ -1.89
THBS1P07996 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
THBS1P07996 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.22□□□□□ -1.89
THBS1P07996 AL356274.2-201ENST00000624379 3752 ntBASIC3.22□□□□□ -1.89
THBS1P07996 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
THBS1P07996 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
THBS1P07996 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
THBS1P07996 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
THBS1P07996 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.21□□□□□ -1.9
THBS1P07996 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
THBS1P07996 RNU6-979P-201ENST00000383896 107 ntBASIC3.21□□□□□ -1.9
THBS1P07996 SNORA27-201ENST00000384323 126 ntBASIC3.21□□□□□ -1.9
THBS1P07996 MIR561-201ENST00000385216 97 ntBASIC3.21□□□□□ -1.9
THBS1P07996 RNU1-101P-201ENST00000391171 127 ntBASIC3.21□□□□□ -1.9
THBS1P07996 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.21□□□□□ -1.9
THBS1P07996 RNU6-887P-201ENST00000410660 100 ntBASIC3.21□□□□□ -1.9
THBS1P07996 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.21□□□□□ -1.9
THBS1P07996 SNX2P2-201ENST00000424553 323 ntBASIC3.21□□□□□ -1.9
THBS1P07996 CST2P1-201ENST00000425770 87 ntBASIC3.21□□□□□ -1.9
THBS1P07996 AC006539.3-201ENST00000454258 129 ntBASIC3.21□□□□□ -1.9
THBS1P07996 RNU7-171P-201ENST00000459581 62 ntBASIC3.21□□□□□ -1.9
THBS1P07996 RNU6-162P-201ENST00000516228 103 ntBASIC3.21□□□□□ -1.9
THBS1P07996 RNU6-1018P-201ENST00000516577 106 ntBASIC3.21□□□□□ -1.9
THBS1P07996 MIR3922-201ENST00000585192 84 ntBASIC3.21□□□□□ -1.9
THBS1P07996 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.21□□□□□ -1.9
THBS1P07996 AC064859.1-201ENST00000624741 174 ntBASIC3.21□□□□□ -1.9
THBS1P07996 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
THBS1P07996 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
THBS1P07996 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
THBS1P07996 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
THBS1P07996 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
THBS1P07996 AC093908.1-201ENST00000623125 8092 ntBASIC3.2□□□□□ -1.9
THBS1P07996 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
THBS1P07996 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
THBS1P07996 AC073346.2-201ENST00000624724 2058 ntBASIC3.2□□□□□ -1.9
THBS1P07996 RNU1-23P-201ENST00000363361 144 ntBASIC3.2□□□□□ -1.9
THBS1P07996 RNA5SP72-201ENST00000364442 117 ntBASIC3.2□□□□□ -1.9
THBS1P07996 Y_RNA.426-201ENST00000384068 113 ntBASIC3.2□□□□□ -1.9
THBS1P07996 RN7SKP111-201ENST00000410349 271 ntBASIC3.2□□□□□ -1.9
THBS1P07996 RNU4-69P-201ENST00000410677 143 ntBASIC3.2□□□□□ -1.9
THBS1P07996 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
THBS1P07996 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.2□□□□□ -1.9
THBS1P07996 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
THBS1P07996 SEM1P1-201ENST00000506694 209 ntBASIC3.2□□□□□ -1.9
THBS1P07996 AC104619.4-201ENST00000510773 249 ntBASIC3.2□□□□□ -1.9
THBS1P07996 RNU6-521P-201ENST00000516663 105 ntBASIC3.2□□□□□ -1.9
THBS1P07996 SNORA70.18-201ENST00000516696 98 ntBASIC3.2□□□□□ -1.9
THBS1P07996 MIR4439-201ENST00000583746 80 ntBASIC3.2□□□□□ -1.9
THBS1P07996 AC096720.1-201ENST00000604441 183 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms