Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 Y_RNA.783-201ENST00000613546 102 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 U2.20-201ENST00000613956 192 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 AC091895.1-201ENST00000624494 256 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DOAP06340 MIR764-201ENST00000390811 85 ntBASIC2.42□□□□□ -2.02
HLA-DOAP06340 Y_RNA.586-201ENST00000391146 98 ntBASIC2.42□□□□□ -2.02
HLA-DOAP06340 Y_RNA.587-201ENST00000391210 103 ntBASIC2.42□□□□□ -2.02
HLA-DOAP06340 RNU6-257P-201ENST00000410238 98 ntBASIC2.42□□□□□ -2.02
HLA-DOAP06340 SNRPGP8-201ENST00000454064 226 ntBASIC2.42□□□□□ -2.02
HLA-DOAP06340 RNU6-437P-201ENST00000459408 95 ntBASIC2.42□□□□□ -2.02
HLA-DOAP06340 AC097462.1-201ENST00000514125 324 ntBASIC2.42□□□□□ -2.02
HLA-DOAP06340 AL391903.3-201ENST00000612158 163 ntBASIC2.42□□□□□ -2.02
HLA-DOAP06340 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HLA-DOAP06340 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HLA-DOAP06340 CENPCP1-201ENST00000533085 2578 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DOAP06340 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-DOAP06340 SNORA33-201ENST00000363664 130 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 RNU4-13P-201ENST00000364019 141 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 SNORD56.5-201ENST00000364281 72 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 Y_RNA.343-201ENST00000365354 112 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 RNU6-417P-201ENST00000384712 107 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 RNU6-1228P-201ENST00000391014 107 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 AC019129.1-201ENST00000403786 261 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 AC008134.1-201ENST00000420943 193 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DOAP06340 HMGN2P34-201ENST00000437647 269 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 AL357134.1-201ENST00000445848 426 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 AC107027.2-201ENST00000512197 115 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 RNU7-172P-201ENST00000517125 64 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 AC015712.3-201ENST00000559380 164 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 AL049861.1-201ENST00000603130 150 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 AL137847.3-201ENST00000611521 109 ntBASIC2.41□□□□□ -2.02
HLA-DOAP06340 SNORD115-3-201ENST00000363100 82 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 SNORD45.3-201ENST00000363836 72 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 RNU4-41P-201ENST00000364426 143 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 RNU6-643P-201ENST00000384018 107 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 RNU6-768P-201ENST00000384683 107 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DOAP06340 RPL36AP21-201ENST00000490372 323 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 RNU6-1041P-201ENST00000516254 102 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 RNU6-856P-201ENST00000516959 98 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 MIR548X2-201ENST00000579776 100 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 DNAJC19P2-201ENST00000593340 302 ntBASIC2.4□□□□□ -2.03
HLA-DOAP06340 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DOAP06340 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DOAP06340 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DOAP06340 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DOAP06340 RNU6-376P-201ENST00000384731 106 ntBASIC2.39□□□□□ -2.03
HLA-DOAP06340 RNA5SP467-201ENST00000391274 118 ntBASIC2.39□□□□□ -2.03
HLA-DOAP06340 AL512604.1-201ENST00000404812 257 ntBASIC2.39□□□□□ -2.03
HLA-DOAP06340 RNU6-1186P-201ENST00000410429 97 ntBASIC2.39□□□□□ -2.03
HLA-DOAP06340 AC011406.1-201ENST00000512440 370 ntBASIC2.39□□□□□ -2.03
HLA-DOAP06340 RNU6-295P-201ENST00000516901 104 ntBASIC2.39□□□□□ -2.03
HLA-DOAP06340 MIR4658-201ENST00000584344 65 ntBASIC2.39□□□□□ -2.03
HLA-DOAP06340 AL365222.1-201ENST00000614661 98 ntBASIC2.39□□□□□ -2.03
HLA-DOAP06340 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DOAP06340 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DOAP06340 RNU6-674P-201ENST00000363831 107 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 RNU6-728P-201ENST00000365375 104 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 RNU6-959P-201ENST00000384671 107 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 U8.13-201ENST00000390842 128 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 RNU6-460P-201ENST00000391158 108 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 MIR1253-201ENST00000408273 105 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 AC245102.2-201ENST00000448956 180 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 RNU2-34P-201ENST00000516534 121 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 RNU7-116P-201ENST00000516940 62 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 RNU7-128P-201ENST00000517247 62 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 NDUFA5P6-201ENST00000542110 379 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 AC073413.2-201ENST00000604332 360 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 AL021707.8-201ENST00000609428 183 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 U6.73-201ENST00000619194 103 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 AC006435.5-201ENST00000624486 112 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 AC009487.4-201ENST00000624969 3585 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 AC010332.2-201ENST00000613083 1904 ntBASIC2.38□□□□□ -2.03
HLA-DOAP06340 Y_RNA.337-201ENST00000365312 102 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 SNORA72-201ENST00000384339 132 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 MIR583-201ENST00000384846 75 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 RNU6-588P-201ENST00000410281 105 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 RN7SKP101-201ENST00000411376 320 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 MTND4LP9-201ENST00000427694 174 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 RNU7-197P-201ENST00000458836 62 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 RNU6-971P-201ENST00000516920 106 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 RNU6-548P-201ENST00000517083 115 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 AC011604.1-201ENST00000545978 196 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 RPL23AP91-201ENST00000569211 455 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 MIR5688-201ENST00000580619 83 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 MIR5002-201ENST00000584713 97 ntBASIC2.37□□□□□ -2.03
HLA-DOAP06340 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HLA-DOAP06340 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DOAP06340 RNU6-1082P-201ENST00000364574 107 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 RNU6-1080P-201ENST00000383982 107 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 Y_RNA.542-201ENST00000384641 111 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 SNORD37.2-201ENST00000391075 66 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 HMGN2P35-201ENST00000412164 270 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 SRIP3-201ENST00000413200 219 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 AC092991.1-201ENST00000477176 376 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 RNU6-1291P-201ENST00000516591 104 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms