Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNU6-667P-201ENST00000517186 102 ntBASIC2.41□□□□□ -2.02
CDKL5O76039 AC002984.1-201ENST00000591692 448 ntBASIC2.41□□□□□ -2.02
CDKL5O76039 U2.20-201ENST00000613956 192 ntBASIC2.41□□□□□ -2.02
CDKL5O76039 AC064859.1-201ENST00000624741 174 ntBASIC2.41□□□□□ -2.02
CDKL5O76039 AL359851.1-201ENST00000569460 4997 ntBASIC2.4□□□□□ -2.02
CDKL5O76039 RNU6-643P-201ENST00000384018 107 ntBASIC2.4□□□□□ -2.03
CDKL5O76039 MIR569-201ENST00000385228 96 ntBASIC2.4□□□□□ -2.03
CDKL5O76039 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CDKL5O76039 RNU6-1228P-201ENST00000391014 107 ntBASIC2.4□□□□□ -2.03
CDKL5O76039 AC060773.1-201ENST00000421698 310 ntBASIC2.4□□□□□ -2.03
CDKL5O76039 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDKL5O76039 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.4□□□□□ -2.03
CDKL5O76039 MIR4448-201ENST00000584360 86 ntBASIC2.4□□□□□ -2.03
CDKL5O76039 AL449363.1-201ENST00000617815 186 ntBASIC2.4□□□□□ -2.03
CDKL5O76039 RNU4-13P-201ENST00000364019 141 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 Y_RNA.291-201ENST00000364886 113 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 RNU4-11P-201ENST00000365287 132 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 Z98742.3-201ENST00000418637 326 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.39□□□□□ -2.03
CDKL5O76039 RPS4XP11-201ENST00000446897 772 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 SNORA4.4-201ENST00000515921 135 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 RNU7-172P-201ENST00000517125 64 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 AC091544.4-201ENST00000555268 342 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 DNAJC19P2-201ENST00000593340 302 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 AL929325.1-201ENST00000603096 117 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 MIR219B-201ENST00000637023 88 ntBASIC2.39□□□□□ -2.03
CDKL5O76039 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.39□□□□□ -2.03
CDKL5O76039 RNU6-674P-201ENST00000363831 107 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 RNU6-728P-201ENST00000365375 104 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 MIR561-201ENST00000385216 97 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 SNORD23.1-201ENST00000408212 104 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 SNORA3.2-201ENST00000408221 125 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 RN7SKP223-201ENST00000410582 62 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 Y_RNA.622-201ENST00000411091 108 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.38□□□□□ -2.03
CDKL5O76039 HMGN2P34-201ENST00000437647 269 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.38□□□□□ -2.03
CDKL5O76039 RNU6-717P-201ENST00000459076 104 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 TRBV12-1-201ENST00000479785 344 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 AL021707.8-201ENST00000609428 183 ntBASIC2.38□□□□□ -2.03
CDKL5O76039 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CDKL5O76039 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CDKL5O76039 RNU4-41P-201ENST00000364426 143 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 RNA5SP160-201ENST00000364866 120 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 Y_RNA.337-201ENST00000365312 102 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 SNORA25B-201ENST00000365507 128 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 SNORA72-201ENST00000384339 132 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 MIR1253-201ENST00000408273 105 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 RN7SKP101-201ENST00000411376 320 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 AL356379.1-201ENST00000414105 126 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 AC010154.1-201ENST00000425857 269 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.37□□□□□ -2.03
CDKL5O76039 SNORA25.12-201ENST00000516202 82 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 IGKV3-31-201ENST00000523109 329 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 MIR548X2-201ENST00000579776 100 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 MIR3945-201ENST00000581853 98 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.37□□□□□ -2.03
CDKL5O76039 U6.73-201ENST00000619194 103 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 AC091895.1-201ENST00000624494 256 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 AP000553.5-201ENST00000641933 54 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 ZNF702P-202ENST00000434269 1966 ntBASIC2.37□□□□□ -2.03
CDKL5O76039 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDKL5O76039 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDKL5O76039 SNORD45.3-201ENST00000363836 72 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 SNORA64-201ENST00000384674 134 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 RNU6-417P-201ENST00000384712 107 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 RNU6-376P-201ENST00000384731 106 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 Y_RNA.586-201ENST00000391146 98 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 Y_RNA.587-201ENST00000391210 103 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 RNU6-257P-201ENST00000410238 98 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 RNU2-40P-201ENST00000410833 196 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 RN7SKP192-201ENST00000411291 327 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.36□□□□□ -2.03
CDKL5O76039 AC011406.1-201ENST00000512440 370 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 CYCSP26-201ENST00000534107 320 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 AL031274.2-201ENST00000599419 203 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 SNORD14A-201ENST00000606526 91 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 AC092881.1-201ENST00000638218 2733 ntBASIC2.36□□□□□ -2.03
CDKL5O76039 snoU2-30.2-201ENST00000362805 70 ntBASIC2.35□□□□□ -2.03
CDKL5O76039 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
CDKL5O76039 RNY3P5-201ENST00000384127 102 ntBASIC2.35□□□□□ -2.03
CDKL5O76039 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.35□□□□□ -2.03
CDKL5O76039 RNU4-43P-201ENST00000410628 137 ntBASIC2.35□□□□□ -2.03
CDKL5O76039 AC245102.2-201ENST00000448956 180 ntBASIC2.35□□□□□ -2.03
CDKL5O76039 AL049861.1-201ENST00000603130 150 ntBASIC2.35□□□□□ -2.03
CDKL5O76039 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.35□□□□□ -2.03
CDKL5O76039 AC100821.1-201ENST00000523153 2479 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 SNORD114-6-201ENST00000364393 72 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 SNORA20-201ENST00000384662 132 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 RNU6-959P-201ENST00000384671 107 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 RNU6-768P-201ENST00000384683 107 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CDKL5O76039 RNA5SP496-201ENST00000391240 109 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 AL023284.1-201ENST00000403956 276 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 MIR1262-201ENST00000408276 93 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 RNU6-1186P-201ENST00000410429 97 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 SNRPGP8-201ENST00000454064 226 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 RNU6-1041P-201ENST00000516254 102 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 RNU7-128P-201ENST00000517247 62 ntBASIC2.34□□□□□ -2.03
CDKL5O76039 AC011604.1-201ENST00000545978 196 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms