Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 AC131280.1-202ENST00000624067 4211 ntBASIC5.08□□□□□ -1.6
NPM3O75607 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NPM3O75607 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.07□□□□□ -1.6
NPM3O75607 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPM3O75607 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NPM3O75607 AC074348.1-201ENST00000426503 132 ntBASIC5.07□□□□□ -1.6
NPM3O75607 AC026402.1-201ENST00000513642 170 ntBASIC5.07□□□□□ -1.6
NPM3O75607 SCARNA14-201ENST00000516903 136 ntBASIC5.07□□□□□ -1.6
NPM3O75607 AC006064.5-201ENST00000541782 248 ntBASIC5.07□□□□□ -1.6
NPM3O75607 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPM3O75607 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPM3O75607 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NPM3O75607 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NPM3O75607 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.06□□□□□ -1.6
NPM3O75607 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NPM3O75607 MIR372-201ENST00000362225 67 ntBASIC5.06□□□□□ -1.6
NPM3O75607 RNU1-44P-201ENST00000384453 163 ntBASIC5.06□□□□□ -1.6
NPM3O75607 MIR3074-201ENST00000384885 81 ntBASIC5.06□□□□□ -1.6
NPM3O75607 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.06□□□□□ -1.6
NPM3O75607 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.06□□□□□ -1.6
NPM3O75607 WWP1P1-201ENST00000466609 2769 ntBASIC5.06□□□□□ -1.6
NPM3O75607 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NPM3O75607 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NPM3O75607 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPM3O75607 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPM3O75607 AL117339.2-201ENST00000430475 180 ntBASIC5.05□□□□□ -1.6
NPM3O75607 AL161431.1-201ENST00000618966 4205 ntBASIC5.05□□□□□ -1.6
NPM3O75607 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPM3O75607 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPM3O75607 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.04□□□□□ -1.6
NPM3O75607 MAPK10-320ENST00000641462 6696 ntBASIC5.04□□□□□ -1.6
NPM3O75607 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPM3O75607 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC5.04□□□□□ -1.6
NPM3O75607 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.04□□□□□ -1.6
NPM3O75607 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NPM3O75607 SNORA60-201ENST00000362396 134 ntBASIC5.04□□□□□ -1.6
NPM3O75607 Y_RNA.491-201ENST00000384417 107 ntBASIC5.04□□□□□ -1.6
NPM3O75607 MIR134-201ENST00000385258 73 ntBASIC5.04□□□□□ -1.6
NPM3O75607 RNU6-663P-201ENST00000391105 106 ntBASIC5.04□□□□□ -1.6
NPM3O75607 BX510359.4-201ENST00000423750 193 ntBASIC5.04□□□□□ -1.6
NPM3O75607 RN7SKP46-201ENST00000515942 234 ntBASIC5.04□□□□□ -1.6
NPM3O75607 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.04□□□□□ -1.6
NPM3O75607 AC067747.1-201ENST00000608026 250 ntBASIC5.04□□□□□ -1.6
NPM3O75607 MIR7151-201ENST00000617477 60 ntBASIC5.04□□□□□ -1.6
NPM3O75607 AC140113.4-201ENST00000622087 222 ntBASIC5.04□□□□□ -1.6
NPM3O75607 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPM3O75607 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPM3O75607 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPM3O75607 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NPM3O75607 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
NPM3O75607 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPM3O75607 RNA5SP130-201ENST00000364431 114 ntBASIC5.03□□□□□ -1.6
NPM3O75607 RNA5SP283-201ENST00000365604 119 ntBASIC5.03□□□□□ -1.6
NPM3O75607 MIR520C-201ENST00000385005 87 ntBASIC5.03□□□□□ -1.6
NPM3O75607 RN7SL601P-201ENST00000471221 293 ntBASIC5.03□□□□□ -1.6
NPM3O75607 MIR548AO-201ENST00000579992 96 ntBASIC5.03□□□□□ -1.6
NPM3O75607 MIR3064-201ENST00000581130 66 ntBASIC5.03□□□□□ -1.6
NPM3O75607 SNORD92-201ENST00000585078 85 ntBASIC5.03□□□□□ -1.6
NPM3O75607 AC034229.5-201ENST00000624258 185 ntBASIC5.03□□□□□ -1.6
NPM3O75607 MIR664A-201ENST00000626086 82 ntBASIC5.03□□□□□ -1.6
NPM3O75607 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPM3O75607 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPM3O75607 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPM3O75607 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.02□□□□□ -1.61
NPM3O75607 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPM3O75607 RNU6-1241P-201ENST00000384536 107 ntBASIC5.02□□□□□ -1.61
NPM3O75607 MIR1911-201ENST00000410783 80 ntBASIC5.02□□□□□ -1.61
NPM3O75607 AC138749.4-201ENST00000563970 127 ntBASIC5.02□□□□□ -1.61
NPM3O75607 XIST_intron.1-201ENST00000619444 68 ntBASIC5.02□□□□□ -1.61
NPM3O75607 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.02□□□□□ -1.61
NPM3O75607 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.02□□□□□ -1.61
NPM3O75607 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC5.02□□□□□ -1.61
NPM3O75607 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPM3O75607 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NPM3O75607 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC5.01□□□□□ -1.61
NPM3O75607 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPM3O75607 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPM3O75607 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPM3O75607 RNA5SP513-201ENST00000364648 118 ntBASIC5.01□□□□□ -1.61
NPM3O75607 RNU6-243P-201ENST00000391140 107 ntBASIC5.01□□□□□ -1.61
NPM3O75607 SNORD66.1-201ENST00000391230 76 ntBASIC5.01□□□□□ -1.61
NPM3O75607 HMGN2P39-201ENST00000398005 273 ntBASIC5.01□□□□□ -1.61
NPM3O75607 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.01□□□□□ -1.61
NPM3O75607 RN7SL604P-201ENST00000492589 296 ntBASIC5.01□□□□□ -1.61
NPM3O75607 RNA5SP481-201ENST00000516814 122 ntBASIC5.01□□□□□ -1.61
NPM3O75607 MIR3935-201ENST00000583472 104 ntBASIC5.01□□□□□ -1.61
NPM3O75607 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.01□□□□□ -1.61
NPM3O75607 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPM3O75607 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NPM3O75607 RNA5SP22-201ENST00000365393 109 ntBASIC5□□□□□ -1.61
NPM3O75607 RNU11-3P-201ENST00000391111 133 ntBASIC5□□□□□ -1.61
NPM3O75607 RNU6-1254P-201ENST00000391266 104 ntBASIC5□□□□□ -1.61
NPM3O75607 RNU6-628P-201ENST00000410675 107 ntBASIC5□□□□□ -1.61
NPM3O75607 IFITM8P-201ENST00000522529 394 ntBASIC5□□□□□ -1.61
NPM3O75607 YWHAEP2-201ENST00000580066 112 ntBASIC5□□□□□ -1.61
NPM3O75607 MIR4286-201ENST00000580651 93 ntBASIC5□□□□□ -1.61
NPM3O75607 YWHAEP3-201ENST00000582767 121 ntBASIC5□□□□□ -1.61
NPM3O75607 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
NPM3O75607 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPM3O75607 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms