Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC006130.2-201ENST00000586202 326 ntBASIC3.72□□□□□ -1.81
RCCD1A6NED2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RCCD1A6NED2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RCCD1A6NED2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RCCD1A6NED2 AC092881.1-201ENST00000638218 2733 ntBASIC3.72□□□□□ -1.81
RCCD1A6NED2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
RCCD1A6NED2 AC245060.5-201ENST00000610778 3293 ntBASIC3.71□□□□□ -1.81
RCCD1A6NED2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
RCCD1A6NED2 Y_RNA.95-201ENST00000363079 95 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RCCD1A6NED2 SNORD77B-201ENST00000391112 67 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 RNU6-402P-201ENST00000410678 103 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 CYCSP19-201ENST00000411715 316 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.71□□□□□ -1.82
RCCD1A6NED2 AL606517.2-201ENST00000442855 241 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.71□□□□□ -1.82
RCCD1A6NED2 RNU6-1018P-201ENST00000516577 106 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 SNORA70.19-201ENST00000516717 90 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 IGLV3-17-201ENST00000519099 244 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 SNORA28-201ENST00000606769 126 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 AC027279.3-201ENST00000625055 122 ntBASIC3.71□□□□□ -1.82
RCCD1A6NED2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RCCD1A6NED2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RCCD1A6NED2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RCCD1A6NED2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCCD1A6NED2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCCD1A6NED2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
RCCD1A6NED2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RCCD1A6NED2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RCCD1A6NED2 RNU6-979P-201ENST00000383896 107 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 MIR3074-201ENST00000384885 81 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 AL353813.1-201ENST00000440700 253 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 Y_RNA.659-201ENST00000515994 113 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 RNU1-45P-201ENST00000517191 141 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 AC023632.4-201ENST00000517783 191 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 MIR4644-201ENST00000579929 84 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 MIR5588-201ENST00000581890 63 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.7□□□□□ -1.82
RCCD1A6NED2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RCCD1A6NED2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCCD1A6NED2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCCD1A6NED2 Y_RNA.190-201ENST00000363964 101 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 Y_RNA.221-201ENST00000364248 96 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 SNORD115-35-201ENST00000365122 82 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 RNU6-279P-201ENST00000391297 101 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 SNORA48.7-201ENST00000391302 135 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 RNU6-887P-201ENST00000410660 100 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 STAG3L5P-204ENST00000443759 179 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 AC104027.1-201ENST00000521887 300 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 MIR3152-201ENST00000579801 74 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 AC091304.10-201ENST00000641554 121 ntBASIC3.69□□□□□ -1.82
RCCD1A6NED2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
RCCD1A6NED2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RCCD1A6NED2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.68□□□□□ -1.82
RCCD1A6NED2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCCD1A6NED2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.68□□□□□ -1.82
RCCD1A6NED2 SNORD115-2-201ENST00000362842 82 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 SNORD115-20-201ENST00000365099 82 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 SNORA62.3-201ENST00000365110 153 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 RNU6-787P-201ENST00000384032 107 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 Y_RNA.494-201ENST00000384432 111 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RCCD1A6NED2 RNU6-220P-201ENST00000390919 107 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 RNA5SP109-201ENST00000391010 116 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 MIR1267-201ENST00000408723 78 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 SNORA11.4-201ENST00000408823 129 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 AL135938.1-201ENST00000443141 297 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 SNORA84-201ENST00000459229 133 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 UBL5P3-201ENST00000475112 231 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 RNU6-1116P-201ENST00000517269 99 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 AP003355.3-201ENST00000623465 114 ntBASIC3.68□□□□□ -1.82
RCCD1A6NED2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCCD1A6NED2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RCCD1A6NED2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.68□□□□□ -1.82
RCCD1A6NED2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RCCD1A6NED2 AC073346.2-201ENST00000624724 2058 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RCCD1A6NED2 RNA5SP493-201ENST00000364115 91 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 AL359837.1-201ENST00000381357 287 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 RNU6-1201P-201ENST00000384227 107 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 MIR591-201ENST00000385290 95 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 RNU6-1319P-201ENST00000390855 104 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 RNU6-747P-201ENST00000390928 104 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 RNU6-241P-201ENST00000391148 104 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 MIR1262-201ENST00000408276 93 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 RNU6-177P-201ENST00000411257 104 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 AC015922.2-201ENST00000435593 184 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 RN7SL542P-201ENST00000467147 294 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 AL049873.1-201ENST00000480540 376 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 RPPH1-2P-201ENST00000516688 293 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 MIR4666B-201ENST00000578142 81 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 AC096720.1-201ENST00000604441 183 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 AC005000.2-201ENST00000605468 310 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.67□□□□□ -1.82
RCCD1A6NED2 MIR8054-201ENST00000620877 86 ntBASIC3.67□□□□□ -1.82
RCCD1A6NED2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCCD1A6NED2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms