Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 Y_RNA.270-201ENST00000364693 104 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 Y_RNA.435-201ENST00000384095 112 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 MIR616-201ENST00000385293 97 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 RNA5SP496-201ENST00000391240 109 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 RNU4-53P-201ENST00000410828 140 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 RN7SKP101-201ENST00000411376 320 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 MLLT10P1-201ENST00000418346 262 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 SNRPGP10-201ENST00000432323 225 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 STAG3L5P-204ENST00000443759 179 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 AC011753.1-201ENST00000451001 220 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 HMGN1P7-201ENST00000491722 313 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 AC026436.1-201ENST00000510537 270 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 SNORA31.10-201ENST00000516482 106 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 SNORD53-201ENST00000579969 78 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 AL049861.1-201ENST00000603130 150 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 AC103810.6-201ENST00000606708 136 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 FTX_2.1-201ENST00000618816 94 ntBASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.72□□□□□ -2.13
IGHV4-28A0A0C4DH34 SNORD68-201ENST00000363214 84 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-103P-201ENST00000363686 107 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 SNORD114-30-201ENST00000364448 72 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNA5SP181-201ENST00000410246 98 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 RN7SKP51-201ENST00000410781 304 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 AL158823.1-201ENST00000418441 478 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.797-201ENST00000515977 94 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC091544.4-201ENST00000555268 342 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR4446-201ENST00000578505 67 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 AL021707.8-201ENST00000609428 183 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC046143.2-201ENST00000609789 160 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 AL391903.3-201ENST00000612158 163 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 AL590808.1-201ENST00000618696 141 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.71□□□□□ -2.14
IGHV4-28A0A0C4DH34 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.121-201ENST00000363309 113 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.412-201ENST00000384001 104 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 SNORA12.1-201ENST00000390873 148 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.587-201ENST00000391210 103 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 AL606845.1-201ENST00000404881 255 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 SNORD11-201ENST00000459124 84 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNA5SP281-201ENST00000516504 135 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 SNORA31.17-201ENST00000516953 127 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR4744-201ENST00000581563 82 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC064859.1-201ENST00000624741 174 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 U6.106-201ENST00000636360 105 ntBASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
IGHV4-28A0A0C4DH34 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-209P-201ENST00000384118 107 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-578P-201ENST00000390980 103 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 RN7SKP200-201ENST00000410564 320 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU7-34P-201ENST00000459394 64 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 NDUFA4P2-201ENST00000489989 244 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC074198.2-201ENST00000508153 258 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR4287-201ENST00000579398 78 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC067747.1-201ENST00000608026 250 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC108706.1-201ENST00000611053 297 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC016717.2-201ENST00000609089 5141 ntBASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.69□□□□□ -2.14
IGHV4-28A0A0C4DH34 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-950P-201ENST00000384651 107 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.555-201ENST00000384673 110 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR522-201ENST00000385071 87 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-1228P-201ENST00000391014 107 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-131P-201ENST00000391144 107 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNA5SP482-201ENST00000391269 118 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.622-201ENST00000411091 108 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC023449.1-201ENST00000454464 154 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RN7SL429P-201ENST00000479090 223 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RN7SL489P-201ENST00000486185 223 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RN7SL327P-201ENST00000488659 223 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 OR9P1P-201ENST00000496431 281 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.662-201ENST00000516028 97 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-561P-201ENST00000516222 102 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU7-28P-201ENST00000516759 62 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 SNORA31.15-201ENST00000516771 132 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNA5SP481-201ENST00000516814 122 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNA5SP402-201ENST00000517148 110 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 AC109810.1-201ENST00000534066 224 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 SNORA28-201ENST00000606769 126 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 uc_338.4-201ENST00000616635 176 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 RN7SL853P-201ENST00000617250 223 ntBASIC1.68□□□□□ -2.14
IGHV4-28A0A0C4DH34 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.75-201ENST00000362927 97 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.240-201ENST00000364469 95 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-275P-201ENST00000364910 107 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-886P-201ENST00000384319 105 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 PCNPP3-201ENST00000393579 471 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms