Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RNU6-472P-201ENST00000384299 107 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.483-201ENST00000384380 101 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 U8.19-201ENST00000459095 133 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AL049830.1-201ENST00000468034 425 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AC091959.1-201ENST00000495857 238 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 RNU1-40P-201ENST00000516816 164 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 RNU1-97P-201ENST00000516872 164 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 SCARNA24.2-201ENST00000516968 130 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 SNORA44.1-201ENST00000517031 108 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AC011604.1-201ENST00000545978 196 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 POLR3GP1-201ENST00000594073 261 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AL929325.1-201ENST00000603096 117 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AP003357.1-201ENST00000604497 148 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AL162730.1-201ENST00000605734 292 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 SNORA28-201ENST00000606769 126 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AL078604.3-201ENST00000615580 211 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 AL359851.1-201ENST00000569460 4997 ntBASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
LSM4Q9Y4Z0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 UBE2WP1-201ENST00000362030 340 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 SNORA1B-201ENST00000362535 133 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 U8.7-201ENST00000364940 136 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 RNA5SP138-201ENST00000365098 114 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 SNORA72.4-201ENST00000384174 132 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 MIR221-201ENST00000385135 110 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 MIR676-201ENST00000390702 67 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 AL034345.1-201ENST00000407768 123 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 HMGN2P19-201ENST00000425149 265 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 AC104332.1-201ENST00000440471 797 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 JTBP1-201ENST00000441314 247 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 RNU7-115P-201ENST00000516433 55 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 MIR514B-201ENST00000516774 80 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 RNU2-56P-201ENST00000516826 190 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 MIR8074-201ENST00000615081 81 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 MIR6132-201ENST00000622083 109 ntBASIC1.69□□□□□ -2.14
LSM4Q9Y4Z0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 RNA5SP160-201ENST00000364866 120 ntBASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.396-201ENST00000383949 103 ntBASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 RNA5SP482-201ENST00000391269 118 ntBASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 SNORA77B-201ENST00000578179 125 ntBASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 MIR219B-201ENST00000637023 88 ntBASIC1.68□□□□□ -2.14
LSM4Q9Y4Z0 RNA5SP99-201ENST00000364020 114 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.217-201ENST00000364214 105 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 SNORA64-201ENST00000384674 134 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 SNORA26.5-201ENST00000391215 123 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 RNU2-14P-201ENST00000411053 191 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 RNU7-141P-201ENST00000459304 62 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 RNU7-34P-201ENST00000459394 64 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.641-201ENST00000459414 105 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.637-201ENST00000459424 114 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 AC117454.1-201ENST00000491120 168 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 RNU6-548P-201ENST00000517083 115 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 AC024405.2-202ENST00000532731 184 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 AL353997.5-201ENST00000618886 171 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.67□□□□□ -2.14
LSM4Q9Y4Z0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 RNU6-899P-201ENST00000363947 107 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.288-201ENST00000364854 92 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 RNU4-52P-201ENST00000384209 138 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 MIR194-1-201ENST00000384892 85 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 RNU6-763P-201ENST00000390865 106 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 SNORA12.1-201ENST00000390873 148 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 Y_RNA.621-201ENST00000411065 96 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 AL161935.2-201ENST00000414627 60 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 STAG3L5P-204ENST00000443759 179 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 HMGN2P23-201ENST00000456759 269 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 SNORD127-201ENST00000458892 86 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 AC099513.1-201ENST00000490423 301 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 AC127455.1-201ENST00000565496 145 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 AC021506.2-201ENST00000612354 169 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 MIR548AY-201ENST00000617669 107 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 U4.1-201ENST00000620349 87 ntBASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
LSM4Q9Y4Z0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.65□□□□□ -2.15
LSM4Q9Y4Z0 RNU6-1048P-201ENST00000364054 107 ntBASIC1.65□□□□□ -2.15
LSM4Q9Y4Z0 RNU6-1080P-201ENST00000383982 107 ntBASIC1.65□□□□□ -2.15
LSM4Q9Y4Z0 RNU6-203P-201ENST00000384038 104 ntBASIC1.65□□□□□ -2.15
LSM4Q9Y4Z0 RNU6-662P-201ENST00000384253 104 ntBASIC1.65□□□□□ -2.15
LSM4Q9Y4Z0 RNU6-463P-201ENST00000384340 107 ntBASIC1.65□□□□□ -2.15
LSM4Q9Y4Z0 snosnR66.1-201ENST00000391095 99 ntBASIC1.65□□□□□ -2.15
LSM4Q9Y4Z0 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
LSM4Q9Y4Z0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms