Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SNORA51-201ENST00000606420 132 ntBASIC3.64□□□□□ -1.83
PCDHGC3Q9UN70 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 MIR184-201ENST00000384962 84 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 RNU6-1275P-201ENST00000391087 107 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 PTMAP2-201ENST00000397627 327 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 RPL23AP67-201ENST00000465341 474 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 RN7SL330P-201ENST00000469709 307 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 Y_RNA.685-201ENST00000516532 108 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 AC026421.1-201ENST00000519101 163 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 AC022523.2-201ENST00000561045 150 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 MIR3922-201ENST00000585192 84 ntBASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
PCDHGC3Q9UN70 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 AC017071.1-201ENST00000564407 2204 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 MIR30E-201ENST00000362104 92 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 RNU4-35P-201ENST00000362588 141 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 RNY3P2-201ENST00000362918 102 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 Y_RNA.342-201ENST00000365352 113 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 RNU6-1072P-201ENST00000384703 107 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 RNU6-443P-201ENST00000384780 107 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 MIR218-2-201ENST00000385006 110 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 SNORA11.4-201ENST00000408823 129 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 Y_RNA.601-201ENST00000410500 113 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 AC245047.3-201ENST00000429428 127 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 TRBV12-1-201ENST00000479785 344 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 AC025518.1-201ENST00000479856 347 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 AC110768.1-201ENST00000509222 400 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 RNU2-35P-201ENST00000516446 142 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 IGKV2-26-201ENST00000518305 343 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 SNORA28-201ENST00000606769 126 ntBASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGC3Q9UN70 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 RNU6-862P-201ENST00000362804 105 ntBASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 RNU6-1134P-201ENST00000365156 101 ntBASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 RNU6-220P-201ENST00000390919 107 ntBASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 RPS29P4-201ENST00000414733 161 ntBASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 PGBD4P5-201ENST00000445958 426 ntBASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 MIR3158-1-201ENST00000583596 81 ntBASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGC3Q9UN70 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 Y_RNA.466-201ENST00000384294 113 ntBASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 RN7SKP200-201ENST00000410564 320 ntBASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 AL022718.1-201ENST00000412004 84 ntBASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 SNORA67.7-201ENST00000516664 135 ntBASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 AL449363.1-201ENST00000617815 186 ntBASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 AL590808.1-201ENST00000618696 141 ntBASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 MIR1245B-201ENST00000636115 69 ntBASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGC3Q9UN70 PWAR6-201ENST00000552334 4618 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 AC093908.1-201ENST00000623125 8092 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 RNU6-661P-201ENST00000362409 107 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 Y_RNA.299-201ENST00000364973 94 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 SNORA27-201ENST00000384323 126 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 RNU6-424P-201ENST00000384367 105 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 RNU6-1152P-201ENST00000384576 107 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 RNU7-96P-201ENST00000459535 64 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 U3.45-201ENST00000607547 219 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 U4atac.1-201ENST00000618345 95 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 U6.98-201ENST00000637157 84 ntBASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGC3Q9UN70 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 MIR342-201ENST00000362212 99 ntBASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 SNORA62.3-201ENST00000365110 153 ntBASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 MIR200C-201ENST00000384980 68 ntBASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 RNU6-893P-201ENST00000458841 100 ntBASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 AC027279.3-201ENST00000625055 122 ntBASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 FAM35CP-201ENST00000554755 2470 ntBASIC3.58□□□□□ -1.84
PCDHGC3Q9UN70 RNU6-1099P-201ENST00000363533 107 ntBASIC3.57□□□□□ -1.84
PCDHGC3Q9UN70 RNA5SP493-201ENST00000364115 91 ntBASIC3.57□□□□□ -1.84
PCDHGC3Q9UN70 Y_RNA.241-201ENST00000364470 117 ntBASIC3.57□□□□□ -1.84
PCDHGC3Q9UN70 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms