Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC025166.1-201ENST00000612411 163 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 AL121890.5-201ENST00000620848 304 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 RNU1-58P-201ENST00000362413 163 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 RNU6-1084P-201ENST00000362498 107 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 SNORD116-21-201ENST00000384507 92 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 RNA5SP293-201ENST00000410527 113 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 AC063976.4-201ENST00000421971 163 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 AC107083.1-201ENST00000439643 279 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 HMGN2P32-201ENST00000444648 269 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 AC010401.1-201ENST00000463867 348 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 SCARNA15-202ENST00000516881 127 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 AL391516.1-201ENST00000554380 2449 ntBASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXD3Q9UJU5 AC017071.1-201ENST00000564407 2204 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 PWAR6-201ENST00000552334 4618 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 RNU6-805P-201ENST00000365643 106 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 RPS27P29-201ENST00000463110 252 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 SNORA31.26-201ENST00000517250 137 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3□□□□□ -1.93
FOXD3Q9UJU5 MIR5004-201ENST00000579078 107 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 MIR4325-201ENST00000583049 90 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 AC069114.2-201ENST00000604699 304 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 MIR7112-201ENST00000616126 65 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3□□□□□ -1.93
FOXD3Q9UJU5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
FOXD3Q9UJU5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3□□□□□ -1.93
FOXD3Q9UJU5 AC245060.5-201ENST00000610778 3293 ntBASIC3□□□□□ -1.93
FOXD3Q9UJU5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 MIR30E-201ENST00000362104 92 ntBASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 Y_RNA.265-201ENST00000364677 108 ntBASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 RNU6-880P-201ENST00000384526 107 ntBASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 RNA5SP136-201ENST00000410906 107 ntBASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 AC007064.1-201ENST00000412238 351 ntBASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 SNRPGP14-201ENST00000435400 219 ntBASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 AC069257.2-201ENST00000441819 155 ntBASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 MIR2276-201ENST00000516886 89 ntBASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 AC022513.1-201ENST00000624512 117 ntBASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXD3Q9UJU5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 SNORA22-201ENST00000383907 134 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 Y_RNA.649-201ENST00000459077 103 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 RN7SL442P-201ENST00000473804 320 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 SNORD45.4-201ENST00000516629 73 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 RNA5SP380-201ENST00000517190 98 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 MIR3126-201ENST00000577443 74 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 SNORA28-201ENST00000606769 126 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 SCARNA15.3-201ENST00000626315 122 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 SCARNA4.1-201ENST00000628597 123 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 MTND5P18-201ENST00000445624 1801 ntBASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.98□□□□□ -1.93
FOXD3Q9UJU5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 SNORD115-28-201ENST00000363931 81 ntBASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 RNU6-268P-201ENST00000364174 107 ntBASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 RNU6-1189P-201ENST00000383958 107 ntBASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 RPL21P3-201ENST00000395517 478 ntBASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
FOXD3Q9UJU5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
FOXD3Q9UJU5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 SNORA80E-201ENST00000384744 137 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 SNORA48.2-201ENST00000390926 124 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 AL606517.2-201ENST00000442855 241 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 SNORA59A-201ENST00000459326 152 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 RNU7-25P-201ENST00000516544 62 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 RNA5SP137-201ENST00000516833 135 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 IGKV1-22-201ENST00000524313 326 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 AC004486.1-201ENST00000546846 233 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
FOXD3Q9UJU5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms