Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.82□□□□□ -1.96
UBP1Q9NZI7 RNU6-818P-201ENST00000364837 108 ntBASIC2.82□□□□□ -1.96
UBP1Q9NZI7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.82□□□□□ -1.96
UBP1Q9NZI7 AL606753.1-201ENST00000427435 87 ntBASIC2.82□□□□□ -1.96
UBP1Q9NZI7 AC245047.4-201ENST00000433189 144 ntBASIC2.82□□□□□ -1.96
UBP1Q9NZI7 AC107083.1-201ENST00000439643 279 ntBASIC2.82□□□□□ -1.96
UBP1Q9NZI7 AC069257.2-201ENST00000441819 155 ntBASIC2.82□□□□□ -1.96
UBP1Q9NZI7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.82□□□□□ -1.96
UBP1Q9NZI7 AL135938.1-201ENST00000443141 297 ntBASIC2.82□□□□□ -1.96
UBP1Q9NZI7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.82□□□□□ -1.96
UBP1Q9NZI7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
UBP1Q9NZI7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.81□□□□□ -1.96
UBP1Q9NZI7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UBP1Q9NZI7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.81□□□□□ -1.96
UBP1Q9NZI7 Y_RNA.634-201ENST00000364811 113 ntBASIC2.81□□□□□ -1.96
UBP1Q9NZI7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
UBP1Q9NZI7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.81□□□□□ -1.96
UBP1Q9NZI7 TRBV12-1-201ENST00000479785 344 ntBASIC2.81□□□□□ -1.96
UBP1Q9NZI7 NDUFA4P2-201ENST00000489989 244 ntBASIC2.81□□□□□ -1.96
UBP1Q9NZI7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.81□□□□□ -1.96
UBP1Q9NZI7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.81□□□□□ -1.96
UBP1Q9NZI7 AC010332.2-201ENST00000613083 1904 ntBASIC2.81□□□□□ -1.96
UBP1Q9NZI7 ZNF702P-202ENST00000434269 1966 ntBASIC2.81□□□□□ -1.96
UBP1Q9NZI7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
UBP1Q9NZI7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
UBP1Q9NZI7 AC245060.5-201ENST00000610778 3293 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 MIR126-201ENST00000362291 85 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 RNU6-978P-201ENST00000364371 103 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 SNORA25.7-201ENST00000364375 127 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 RNU1-112P-201ENST00000364401 164 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 MIR634-201ENST00000385208 97 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 RNU11-3P-201ENST00000391111 133 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 SNORD88.1-201ENST00000408684 91 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 SNORA25.12-201ENST00000516202 82 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 RNU7-28P-201ENST00000516759 62 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 AC079600.2-201ENST00000550076 130 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 AL591926.4-201ENST00000616895 298 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 CTSLP2-204ENST00000629029 392 ntBASIC2.8□□□□□ -1.96
UBP1Q9NZI7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.79□□□□□ -1.96
UBP1Q9NZI7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.79□□□□□ -1.96
UBP1Q9NZI7 MIR518A2-201ENST00000384966 87 ntBASIC2.79□□□□□ -1.96
UBP1Q9NZI7 SNORA40-201ENST00000388090 126 ntBASIC2.79□□□□□ -1.96
UBP1Q9NZI7 Y_RNA.586-201ENST00000391146 98 ntBASIC2.79□□□□□ -1.96
UBP1Q9NZI7 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
UBP1Q9NZI7 MIR548I2-201ENST00000408348 149 ntBASIC2.79□□□□□ -1.96
UBP1Q9NZI7 AC245047.3-201ENST00000429428 127 ntBASIC2.79□□□□□ -1.96
UBP1Q9NZI7 FTH1P12-201ENST00000432137 551 ntBASIC2.79□□□□□ -1.96
UBP1Q9NZI7 AC120024.3-201ENST00000603167 156 ntBASIC2.79□□□□□ -1.96
UBP1Q9NZI7 AC022217.4-201ENST00000604389 163 ntBASIC2.79□□□□□ -1.96
UBP1Q9NZI7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
UBP1Q9NZI7 SNORA12.1-201ENST00000390873 148 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 RNA5SP482-201ENST00000391269 118 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 HMGN2P39-201ENST00000398005 273 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 MIR1283-2-201ENST00000408621 87 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.78□□□□□ -1.96
UBP1Q9NZI7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.78□□□□□ -1.96
UBP1Q9NZI7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.78□□□□□ -1.96
UBP1Q9NZI7 AC087499.2-201ENST00000432861 149 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.78□□□□□ -1.96
UBP1Q9NZI7 SNORA9.3-201ENST00000516383 129 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 RNU6-365P-201ENST00000517113 106 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 MIR4762-201ENST00000585261 75 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 AC008507.4-201ENST00000585464 127 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 AC006386.2-201ENST00000624491 75 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 AC012005.1-201ENST00000624575 75 ntBASIC2.78□□□□□ -1.96
UBP1Q9NZI7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
UBP1Q9NZI7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
UBP1Q9NZI7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
UBP1Q9NZI7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.96
UBP1Q9NZI7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.77□□□□□ -1.97
UBP1Q9NZI7 MIR26A1-201ENST00000362205 77 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 Y_RNA.91-201ENST00000363042 107 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 U8.5-201ENST00000364528 136 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 Y_RNA.486-201ENST00000384398 107 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 MIR522-201ENST00000385071 87 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 MIR887-201ENST00000401258 79 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 AL138827.1-201ENST00000402666 306 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 RNU6-257P-201ENST00000410238 98 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.77□□□□□ -1.97
UBP1Q9NZI7 RNU7-197P-201ENST00000458836 62 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 SNORA59A-201ENST00000459326 152 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 MRPS17P9-201ENST00000511924 393 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 AC084364.2-201ENST00000546924 395 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 AC091544.4-201ENST00000555268 342 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 MIR3605-201ENST00000583214 100 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 AC006023.1-201ENST00000603944 259 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 SCARNA15.3-201ENST00000626315 122 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 SCARNA4.1-201ENST00000628597 123 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.77□□□□□ -1.97
UBP1Q9NZI7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
UBP1Q9NZI7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.77□□□□□ -1.97
UBP1Q9NZI7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
UBP1Q9NZI7 RNU6-1117P-201ENST00000384525 104 ntBASIC2.76□□□□□ -1.97
UBP1Q9NZI7 MIR597-201ENST00000384968 97 ntBASIC2.76□□□□□ -1.97
UBP1Q9NZI7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
UBP1Q9NZI7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
UBP1Q9NZI7 RNU6-588P-201ENST00000410281 105 ntBASIC2.76□□□□□ -1.97
UBP1Q9NZI7 RNU6-504P-201ENST00000516568 104 ntBASIC2.76□□□□□ -1.97
UBP1Q9NZI7 AC090142.3-201ENST00000519012 385 ntBASIC2.76□□□□□ -1.97
UBP1Q9NZI7 MIR5094-201ENST00000578766 85 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms