Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.5□□□□□ -2.17
NDE1Q9NXR1 U1.36-201ENST00000620684 176 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
NDE1Q9NXR1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NDE1Q9NXR1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 RNU6-472P-201ENST00000384299 107 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 RNU6-296P-201ENST00000384608 107 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 RNU2-7P-201ENST00000410794 178 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.49□□□□□ -2.17
NDE1Q9NXR1 MTCYBP9-201ENST00000431021 303 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 MTCO1P5-201ENST00000433573 344 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 SUMO1P2-201ENST00000452524 304 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 AC091021.1-201ENST00000468051 388 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 TRBVB-201ENST00000477100 408 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.49□□□□□ -2.17
NDE1Q9NXR1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 AC022217.4-201ENST00000604389 163 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 AL162730.1-201ENST00000605734 292 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 AP001282.2-201ENST00000616149 309 ntBASIC1.49□□□□□ -2.17
NDE1Q9NXR1 RNU6-1048P-201ENST00000364054 107 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.237-201ENST00000364439 102 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 MIR515-2-201ENST00000384883 83 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 MIR515-1-201ENST00000384884 83 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 HSPE1P9-201ENST00000440046 311 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 RPS27P1-201ENST00000450552 247 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 RPS26P45-201ENST00000471748 340 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 RNU6-1338P-201ENST00000516328 91 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.48□□□□□ -2.17
NDE1Q9NXR1 AL161670.1-201ENST00000554348 137 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 AC015720.1-201ENST00000565251 277 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 MIR4713-201ENST00000582691 75 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 AC004832.4-201ENST00000608952 331 ntBASIC1.48□□□□□ -2.17
NDE1Q9NXR1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.48□□□□□ -2.17
NDE1Q9NXR1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
NDE1Q9NXR1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NDE1Q9NXR1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 MIR583-201ENST00000384846 75 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 MIR520A-201ENST00000384862 85 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 snosnR66.1-201ENST00000391095 99 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 RNA5SP212-201ENST00000391223 107 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 MIR1302-6-201ENST00000408466 90 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 RNU2-14P-201ENST00000411053 191 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 AC010154.1-201ENST00000425857 269 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 RPS20P10-201ENST00000451209 253 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.47□□□□□ -2.17
NDE1Q9NXR1 RNU6-191P-201ENST00000516295 94 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 RNU2-31P-201ENST00000516954 155 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 AC024995.1-201ENST00000523014 93 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 AC022254.1-201ENST00000567857 235 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 AP000942.3-201ENST00000603702 160 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.47□□□□□ -2.17
NDE1Q9NXR1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.47□□□□□ -2.17
NDE1Q9NXR1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NDE1Q9NXR1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.46□□□□□ -2.18
NDE1Q9NXR1 AC018630.2-201ENST00000534866 2403 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 SNORA25.1-201ENST00000362326 128 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 SNORA63D-201ENST00000364359 132 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 SNORA26.9-201ENST00000391322 122 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.46□□□□□ -2.18
NDE1Q9NXR1 AC245047.3-201ENST00000429428 127 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 AC091959.1-201ENST00000495857 238 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.46□□□□□ -2.18
NDE1Q9NXR1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.46□□□□□ -2.18
NDE1Q9NXR1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.46□□□□□ -2.18
NDE1Q9NXR1 MIR6079-201ENST00000635807 62 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 AC068647.2-201ENST00000637380 353 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 AC134026.1-201ENST00000623249 2239 ntBASIC1.46□□□□□ -2.18
NDE1Q9NXR1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
NDE1Q9NXR1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
NDE1Q9NXR1 SNORD114-7-201ENST00000362520 77 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.136-201ENST00000363444 102 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 RNU4-13P-201ENST00000364019 141 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 RNU6-662P-201ENST00000384253 104 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 SNORA53-201ENST00000391141 249 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 RNU2-38P-201ENST00000410856 79 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 AC009310.1-201ENST00000414414 451 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 RPS4XP11-201ENST00000446897 772 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 HSPE1P13-201ENST00000451143 297 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 AC233266.1-201ENST00000454518 96 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 SNORA31.10-201ENST00000516482 106 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 RNU6-250P-201ENST00000516958 103 ntBASIC1.45□□□□□ -2.18
NDE1Q9NXR1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.45□□□□□ -2.18
NDE1Q9NXR1 AC242852.1-201ENST00000612151 96 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms