Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
CNTNAP3Q9BZ76 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 RNU4-35P-201ENST00000362588 141 ntBASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 MIR504-201ENST00000385065 83 ntBASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 DBIP2-201ENST00000419076 262 ntBASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 MIR5004-201ENST00000579078 107 ntBASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 MIR3162-201ENST00000581818 82 ntBASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 AC006441.5-201ENST00000612680 209 ntBASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 AC091932.4-201ENST00000623386 200 ntBASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CNTNAP3Q9BZ76 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 SNORD115-28-201ENST00000363931 81 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 RNU6-438P-201ENST00000365561 103 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 SNORA44-201ENST00000384584 132 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 Y_RNA.545-201ENST00000384652 105 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 U8.15-201ENST00000390947 134 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 SNORA70.14-201ENST00000516205 110 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 RNU7-25P-201ENST00000516544 62 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 MIR4439-201ENST00000583746 80 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 AC002984.1-201ENST00000591692 448 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 AL513534.2-201ENST00000603836 250 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 MIR486-1-201ENST00000612171 68 ntBASIC3.51□□□□□ -1.85
CNTNAP3Q9BZ76 GABRG2-229ENST00000641017 3628 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 AC093908.1-201ENST00000623125 8092 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 MIR422A-201ENST00000362286 90 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 RNU4-82P-201ENST00000362443 140 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 RNA5SP144-201ENST00000410846 116 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 AL512326.2-201ENST00000426359 151 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 AC004223.1-201ENST00000479840 271 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 RNU6-523P-201ENST00000516304 54 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 RNA5SP164-201ENST00000516533 110 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 AC004812.1-201ENST00000540773 146 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 AC091544.4-201ENST00000555268 342 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 MIR4778-201ENST00000577635 80 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 AC090115.4-201ENST00000609970 188 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 MIR7851-201ENST00000610611 160 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 UCA1.1-201ENST00000620952 75 ntBASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CNTNAP3Q9BZ76 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 Y_RNA.351-201ENST00000365436 96 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 Y_RNA.547-201ENST00000384654 119 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 SNORA7.5-201ENST00000410672 110 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 AC009414.1-201ENST00000427200 443 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 RNU7-80P-201ENST00000459562 61 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 RPL23AP63-201ENST00000498752 471 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 RAC1P2-201ENST00000511164 579 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 ELOCP29-201ENST00000588193 334 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 AC022217.4-201ENST00000604389 163 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 MIR7157-201ENST00000635801 60 ntBASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CNTNAP3Q9BZ76 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CNTNAP3Q9BZ76 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms