Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 RNA5SP131-201ENST00000365452 119 ntBASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 MIR1203-201ENST00000408812 85 ntBASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 SNORD83.1-201ENST00000411362 77 ntBASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 snoU13.21-201ENST00000459368 105 ntBASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 RNU7-160P-201ENST00000516660 62 ntBASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 RNU6-548P-201ENST00000517083 115 ntBASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 RNU7-161P-201ENST00000517289 62 ntBASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 MIR6774-201ENST00000614651 70 ntBASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP3-3Q9BYR6 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 RNA5SP264-201ENST00000363115 107 ntBASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 RNU6-250P-201ENST00000516958 103 ntBASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 AC079905.1-201ENST00000549280 475 ntBASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 RN7SL544P-201ENST00000617232 284 ntBASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 MIR6839-201ENST00000620425 113 ntBASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 RN7SL763P-201ENST00000620922 284 ntBASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 DNM1P47-203ENST00000571780 12667 ntBASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP3-3Q9BYR6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC2.65□□□□□ -1.98
KRTAP3-3Q9BYR6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
KRTAP3-3Q9BYR6 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
KRTAP3-3Q9BYR6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.65□□□□□ -1.98
KRTAP3-3Q9BYR6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 U8.2-201ENST00000363156 134 ntBASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 RNU6-934P-201ENST00000365154 107 ntBASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 RNU7-104P-201ENST00000459398 79 ntBASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 GHRLOS.1-201ENST00000610995 70 ntBASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 AC024884.1-201ENST00000620583 399 ntBASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP3-3Q9BYR6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 RNA5SP126-201ENST00000365092 109 ntBASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 SNORA16A-201ENST00000384342 137 ntBASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 SNORD28-201ENST00000384706 75 ntBASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 MIR513A1-201ENST00000385138 129 ntBASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 AC068228.1-201ENST00000461723 211 ntBASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 RN7SL814P-201ENST00000487715 300 ntBASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 AC025458.1-201ENST00000506046 166 ntBASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 AC091905.4-201ENST00000623432 202 ntBASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP3-3Q9BYR6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 MIR518A2-201ENST00000384966 87 ntBASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 MIR1275-201ENST00000408770 80 ntBASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 AC004552.1-201ENST00000419089 348 ntBASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC2.63□□□□□ -1.99
KRTAP3-3Q9BYR6 TIMM8BP2-201ENST00000445940 251 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms