Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 ZNF271P-202ENST00000465539 1970 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 RNA5SP139-201ENST00000364340 117 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 Y_RNA.430-201ENST00000384081 110 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-1201P-201ENST00000384227 107 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 HMGN2P7-201ENST00000456186 273 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 RNU2-34P-201ENST00000516534 121 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 SNORD36C-201ENST00000516733 66 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 RNU7-143P-201ENST00000516781 65 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-586P-201ENST00000517265 104 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 MIR4425-201ENST00000580572 84 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3BQ96NU0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.53□□□□□ -1.85
CNTNAP3BQ96NU0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 RNU4-35P-201ENST00000362588 141 ntBASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 MIR504-201ENST00000385065 83 ntBASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 DBIP2-201ENST00000419076 262 ntBASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 MIR5004-201ENST00000579078 107 ntBASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 MIR3162-201ENST00000581818 82 ntBASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 AC006441.5-201ENST00000612680 209 ntBASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 U7.8-201ENST00000619968 63 ntBASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 AC091932.4-201ENST00000623386 200 ntBASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CNTNAP3BQ96NU0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 SNORD115-28-201ENST00000363931 81 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 RNU6-438P-201ENST00000365561 103 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 SNORA44-201ENST00000384584 132 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 Y_RNA.545-201ENST00000384652 105 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 U8.15-201ENST00000390947 134 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 SNORA70.14-201ENST00000516205 110 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 RNU7-25P-201ENST00000516544 62 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 MIR4439-201ENST00000583746 80 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 AC002984.1-201ENST00000591692 448 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 AL513534.2-201ENST00000603836 250 ntBASIC3.51□□□□□ -1.85
CNTNAP3BQ96NU0 GABRG2-229ENST00000641017 3628 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 AC093908.1-201ENST00000623125 8092 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 MIR422A-201ENST00000362286 90 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 RNU4-82P-201ENST00000362443 140 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 RNA5SP144-201ENST00000410846 116 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 AL512326.2-201ENST00000426359 151 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 AC004223.1-201ENST00000479840 271 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 RNU6-523P-201ENST00000516304 54 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 RNA5SP164-201ENST00000516533 110 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 AC004812.1-201ENST00000540773 146 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 AC091544.4-201ENST00000555268 342 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 MIR4778-201ENST00000577635 80 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 AC090115.4-201ENST00000609970 188 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 MIR7851-201ENST00000610611 160 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 UCA1.1-201ENST00000620952 75 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 AC244205.2-202ENST00000635781 342 ntBASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNTNAP3BQ96NU0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 Y_RNA.351-201ENST00000365436 96 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 Y_RNA.547-201ENST00000384654 119 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 SNORA7.5-201ENST00000410672 110 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 AC009414.1-201ENST00000427200 443 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms