Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 Y_RNA.215-201ENST00000364204 112 ntBASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 SNORD114-6-201ENST00000364393 72 ntBASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 RN7SKP101-201ENST00000411376 320 ntBASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 RPS12P2-201ENST00000439728 269 ntBASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 RPS4XP11-201ENST00000446897 772 ntBASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 AC245102.2-201ENST00000448956 180 ntBASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 RPL23AP54-201ENST00000495129 419 ntBASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 RNA5SP148-201ENST00000516527 94 ntBASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.81□□□□□ -1.96
CHAMP1Q96JM3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 ZNF271P-202ENST00000465539 1970 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 RNA5SP456-201ENST00000364002 114 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 RNU1-138P-201ENST00000384093 164 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 SNORA72-201ENST00000384339 132 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 RNU6-136P-201ENST00000384663 107 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 Y_RNA.568-201ENST00000384742 113 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 MIR627-201ENST00000384979 97 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 MIR9-1-201ENST00000385198 89 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 MIR548I2-201ENST00000408348 149 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 SRIP3-201ENST00000413200 219 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 AC010154.1-201ENST00000425857 269 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 AL606753.1-201ENST00000427435 87 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 HMGN2P34-201ENST00000437647 269 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 AC011406.1-201ENST00000512440 370 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 AC108729.3-201ENST00000513484 108 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 RNU7-172P-201ENST00000517125 64 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 RNU7-128P-201ENST00000517247 62 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 AL929325.1-201ENST00000603096 117 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 AC046143.2-201ENST00000609789 160 ntBASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CHAMP1Q96JM3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.79□□□□□ -1.96
CHAMP1Q96JM3 RNY3P5-201ENST00000384127 102 ntBASIC2.79□□□□□ -1.96
CHAMP1Q96JM3 MIR15B-201ENST00000385045 98 ntBASIC2.79□□□□□ -1.96
CHAMP1Q96JM3 MIR1262-201ENST00000408276 93 ntBASIC2.79□□□□□ -1.96
CHAMP1Q96JM3 RNU4-43P-201ENST00000410628 137 ntBASIC2.79□□□□□ -1.96
CHAMP1Q96JM3 AP001485.1-201ENST00000604799 199 ntBASIC2.79□□□□□ -1.96
CHAMP1Q96JM3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.79□□□□□ -1.96
CHAMP1Q96JM3 MIR3658-201ENST00000636291 56 ntBASIC2.79□□□□□ -1.96
CHAMP1Q96JM3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.78□□□□□ -1.96
CHAMP1Q96JM3 RNU6-151P-201ENST00000364158 107 ntBASIC2.78□□□□□ -1.96
CHAMP1Q96JM3 MIR569-201ENST00000385228 96 ntBASIC2.78□□□□□ -1.96
CHAMP1Q96JM3 AL353689.1-201ENST00000438895 199 ntBASIC2.78□□□□□ -1.96
CHAMP1Q96JM3 AL121914.1-201ENST00000450188 156 ntBASIC2.78□□□□□ -1.96
CHAMP1Q96JM3 SNRPGP8-201ENST00000454064 226 ntBASIC2.78□□□□□ -1.96
CHAMP1Q96JM3 AC107027.2-201ENST00000512197 115 ntBASIC2.78□□□□□ -1.96
CHAMP1Q96JM3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.78□□□□□ -1.96
CHAMP1Q96JM3 U6.108-201ENST00000637764 58 ntBASIC2.78□□□□□ -1.96
CHAMP1Q96JM3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 RNU6-728P-201ENST00000365375 104 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.355-201ENST00000365462 98 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 RNU6-643P-201ENST00000384018 107 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 RNU6-417P-201ENST00000384712 107 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 RNA5SP496-201ENST00000391240 109 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 HMGN2P3-201ENST00000433603 273 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 HMGN2P5-201ENST00000436882 273 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 AL353149.1-201ENST00000610667 244 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 U4atac.1-201ENST00000618345 95 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 MIR338-201ENST00000636369 67 ntBASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CHAMP1Q96JM3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHAMP1Q96JM3 RNU4-13P-201ENST00000364019 141 ntBASIC2.76□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.497-201ENST00000384447 98 ntBASIC2.76□□□□□ -1.97
CHAMP1Q96JM3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CHAMP1Q96JM3 AL117342.1-201ENST00000404861 406 ntBASIC2.76□□□□□ -1.97
CHAMP1Q96JM3 RNU1-131P-201ENST00000458943 161 ntBASIC2.76□□□□□ -1.97
CHAMP1Q96JM3 AC091178.2-201ENST00000584401 117 ntBASIC2.76□□□□□ -1.97
CHAMP1Q96JM3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
CHAMP1Q96JM3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHAMP1Q96JM3 AC005336.3-201ENST00000623833 2679 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 RNU6-443P-201ENST00000384780 107 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 MIR1253-201ENST00000408273 105 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 AC006461.1-201ENST00000412637 326 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 AC092427.1-202ENST00000430569 476 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 Z96811.1-201ENST00000445880 108 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 RNU6-1053P-201ENST00000515930 101 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 RNU6-426P-201ENST00000516464 97 ntBASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.75□□□□□ -1.97
CHAMP1Q96JM3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 SNORD45.3-201ENST00000363836 72 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.74□□□□□ -1.97
CHAMP1Q96JM3 RNU4-41P-201ENST00000364426 143 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms