Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RNU1-41P-201ENST00000516161 162 ntBASIC2.91□□□□□ -1.94
DDX11Q96FC9 RNU1-48P-201ENST00000516400 162 ntBASIC2.91□□□□□ -1.94
DDX11Q96FC9 AC018630.3-201ENST00000542637 96 ntBASIC2.91□□□□□ -1.94
DDX11Q96FC9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
DDX11Q96FC9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
DDX11Q96FC9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
DDX11Q96FC9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
DDX11Q96FC9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
DDX11Q96FC9 RNA5SP289-201ENST00000362332 137 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 SNORD45.3-201ENST00000363836 72 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 RNU6-460P-201ENST00000391158 108 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 RN7SKP101-201ENST00000411376 320 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 AL135786.1-201ENST00000415892 214 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX11Q96FC9 SNRPGP8-201ENST00000454064 226 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 RNU6-437P-201ENST00000459408 95 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 CKS1BP2-201ENST00000497342 240 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX11Q96FC9 RNA5SP20-201ENST00000515976 84 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 RNU6-586P-201ENST00000517265 104 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 AC025647.1-201ENST00000517879 253 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.9□□□□□ -1.95
DDX11Q96FC9 AL021707.8-201ENST00000609428 183 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.9□□□□□ -1.95
DDX11Q96FC9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
DDX11Q96FC9 RNU6-834P-201ENST00000362367 110 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 RNU6-597P-201ENST00000365620 102 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 Y_RNA.563-201ENST00000384707 108 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 RNA5SP496-201ENST00000391240 109 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 SNORA75.5-201ENST00000391291 81 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 RNU6-588P-201ENST00000410281 105 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 RNU4-53P-201ENST00000410828 140 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
DDX11Q96FC9 CYCSP49-201ENST00000420810 319 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.89□□□□□ -1.95
DDX11Q96FC9 RNU7-26P-201ENST00000458980 63 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 AC010531.2-201ENST00000465012 153 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX11Q96FC9 RNU4-57P-201ENST00000515980 135 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 RNU6-659P-201ENST00000516454 104 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 AL049779.4-201ENST00000604500 156 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 AC006435.5-201ENST00000624486 112 ntBASIC2.89□□□□□ -1.95
DDX11Q96FC9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
DDX11Q96FC9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
DDX11Q96FC9 RNU1-23P-201ENST00000363361 144 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 RNU6-153P-201ENST00000364422 104 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 RNU6-117P-201ENST00000365415 107 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 Y_RNA.521-201ENST00000384560 114 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 SNORA3.2-201ENST00000408221 125 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 RNA5SP511-201ENST00000410487 115 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 RNU2-63P-201ENST00000410792 194 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 HMGN2P18-201ENST00000450680 270 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 RN7SL636P-201ENST00000497504 294 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 Y_RNA.686-201ENST00000516548 134 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 RNU6-919P-201ENST00000516731 104 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 AL031274.2-201ENST00000599419 203 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 AL391516.1-201ENST00000554380 2449 ntBASIC2.88□□□□□ -1.95
DDX11Q96FC9 Z82209.1-201ENST00000422141 2135 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 ZNF658B-202ENST00000615961 3375 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 RNA5SP393-201ENST00000363423 117 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 RNA5SP456-201ENST00000364002 114 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 RNU6-1235P-201ENST00000384559 107 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 Y_RNA.622-201ENST00000411091 108 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 RNU6-498P-201ENST00000459468 107 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 RPL23AP54-201ENST00000495129 419 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 RNU6-948P-201ENST00000516374 107 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 AP001328.1-201ENST00000528550 176 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 AC015720.1-201ENST00000565251 277 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 U7.2-201ENST00000607576 63 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 MIR5739-201ENST00000619803 80 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 FO624990.1-201ENST00000636373 85 ntBASIC2.87□□□□□ -1.95
DDX11Q96FC9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
DDX11Q96FC9 MIR340-201ENST00000362125 95 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 SNORD114-30-201ENST00000364448 72 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 RNU6-1082P-201ENST00000364574 107 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 RNU6-1325P-201ENST00000364905 105 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 RNU1-51P-201ENST00000365345 176 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.86□□□□□ -1.95
DDX11Q96FC9 RNU2-48P-201ENST00000410694 191 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 RNU2-55P-201ENST00000411146 174 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 Z98742.3-201ENST00000418637 326 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX11Q96FC9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX11Q96FC9 CYP2C59P-201ENST00000457790 269 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 RNA5SP402-201ENST00000517148 110 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 AL160236.1-201ENST00000556317 195 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 MIR378D2-201ENST00000580636 98 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 AC120024.3-201ENST00000603167 156 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 AC011603.4-201ENST00000611325 277 ntBASIC2.86□□□□□ -1.95
DDX11Q96FC9 MIR21-201ENST00000362134 72 ntBASIC2.85□□□□□ -1.95
DDX11Q96FC9 RNU6-1336P-201ENST00000383886 109 ntBASIC2.85□□□□□ -1.95
DDX11Q96FC9 RNU6-484P-201ENST00000384016 107 ntBASIC2.85□□□□□ -1.95
DDX11Q96FC9 RNU1-138P-201ENST00000384093 164 ntBASIC2.85□□□□□ -1.95
DDX11Q96FC9 Y_RNA.525-201ENST00000384570 113 ntBASIC2.85□□□□□ -1.95
DDX11Q96FC9 RNU6-136P-201ENST00000384663 107 ntBASIC2.85□□□□□ -1.95
DDX11Q96FC9 SNORA31.11-201ENST00000516528 139 ntBASIC2.85□□□□□ -1.95
DDX11Q96FC9 RNU2-56P-201ENST00000516826 190 ntBASIC2.85□□□□□ -1.95
DDX11Q96FC9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms