Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-CQ95604 MIR592-201ENST00000384959 97 ntBASIC3.72□□□□□ -1.81
HLA-CQ95604 SNORD78.1-201ENST00000390866 65 ntBASIC3.72□□□□□ -1.81
HLA-CQ95604 TRIAP1P1-201ENST00000427062 225 ntBASIC3.72□□□□□ -1.81
HLA-CQ95604 PGBD4P5-201ENST00000445958 426 ntBASIC3.72□□□□□ -1.81
HLA-CQ95604 AC006539.3-201ENST00000454258 129 ntBASIC3.72□□□□□ -1.81
HLA-CQ95604 RNU6-893P-201ENST00000458841 100 ntBASIC3.72□□□□□ -1.81
HLA-CQ95604 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-CQ95604 uc_338.32-201ENST00000615087 172 ntBASIC3.72□□□□□ -1.81
HLA-CQ95604 U4.6-201ENST00000621618 127 ntBASIC3.72□□□□□ -1.81
HLA-CQ95604 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-CQ95604 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HLA-CQ95604 TNPO1P3-201ENST00000436471 2662 ntBASIC3.72□□□□□ -1.81
HLA-CQ95604 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-CQ95604 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-CQ95604 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-CQ95604 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-CQ95604 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HLA-CQ95604 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
HLA-CQ95604 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
HLA-CQ95604 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-CQ95604 MIR422A-201ENST00000362286 90 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 Y_RNA.96-201ENST00000363092 109 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 SNORD115-19-201ENST00000363098 82 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 SNORD115-18-201ENST00000363293 82 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 SNORD115-17-201ENST00000364612 82 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 SNORD6-201ENST00000365444 73 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 RNU6-160P-201ENST00000384591 107 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 SNORA80E-201ENST00000384744 137 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 RNU6-667P-201ENST00000517186 102 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 IGKV2-26-201ENST00000518305 343 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 MIR3945-201ENST00000581853 98 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-CQ95604 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-CQ95604 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-CQ95604 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
HLA-CQ95604 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HLA-CQ95604 Z83843.1-201ENST00000604070 3685 ntBASIC3.71□□□□□ -1.82
HLA-CQ95604 MIR449A-201ENST00000362113 91 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 RNU6-1099P-201ENST00000363533 107 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 RNA5SP322-201ENST00000363617 119 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 RNU6-573P-201ENST00000383938 106 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 AL109933.2-201ENST00000452651 260 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 RN7SL297P-201ENST00000483161 293 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 RNU2-35P-201ENST00000516446 142 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 RNU7-6P-201ENST00000516845 62 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 IGLV3-26-201ENST00000520756 302 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-CQ95604 AC022523.2-201ENST00000561045 150 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 MIR4694-201ENST00000578534 80 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 AP003355.3-201ENST00000623465 114 ntBASIC3.7□□□□□ -1.82
HLA-CQ95604 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-CQ95604 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-CQ95604 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
HLA-CQ95604 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-CQ95604 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-CQ95604 SNORD38C-201ENST00000384381 69 ntBASIC3.69□□□□□ -1.82
HLA-CQ95604 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HLA-CQ95604 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-CQ95604 AL163195.1-201ENST00000496941 348 ntBASIC3.69□□□□□ -1.82
HLA-CQ95604 MIR3616-201ENST00000584070 92 ntBASIC3.69□□□□□ -1.82
HLA-CQ95604 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-CQ95604 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.69□□□□□ -1.82
HLA-CQ95604 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-CQ95604 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
HLA-CQ95604 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-CQ95604 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HLA-CQ95604 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-CQ95604 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-CQ95604 Y_RNA.299-201ENST00000364973 94 ntBASIC3.68□□□□□ -1.82
HLA-CQ95604 MIR513A2-201ENST00000385249 127 ntBASIC3.68□□□□□ -1.82
HLA-CQ95604 RNU4-47P-201ENST00000410876 114 ntBASIC3.68□□□□□ -1.82
HLA-CQ95604 RNU6-592P-201ENST00000411333 103 ntBASIC3.68□□□□□ -1.82
HLA-CQ95604 AC003685.2-201ENST00000422795 395 ntBASIC3.68□□□□□ -1.82
HLA-CQ95604 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-CQ95604 MIR4644-201ENST00000579929 84 ntBASIC3.68□□□□□ -1.82
HLA-CQ95604 AC020914.4-201ENST00000597690 277 ntBASIC3.68□□□□□ -1.82
HLA-CQ95604 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.68□□□□□ -1.82
HLA-CQ95604 AL137790.1-201ENST00000634283 177 ntBASIC3.68□□□□□ -1.82
HLA-CQ95604 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.68□□□□□ -1.82
HLA-CQ95604 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-CQ95604 SNORA33-201ENST00000363664 130 ntBASIC3.67□□□□□ -1.82
HLA-CQ95604 AL138878.1-201ENST00000405131 347 ntBASIC3.67□□□□□ -1.82
HLA-CQ95604 AL022718.1-201ENST00000412004 84 ntBASIC3.67□□□□□ -1.82
HLA-CQ95604 RNU7-96P-201ENST00000459535 64 ntBASIC3.67□□□□□ -1.82
HLA-CQ95604 RPL23AP67-201ENST00000465341 474 ntBASIC3.67□□□□□ -1.82
HLA-CQ95604 RPS23P4-201ENST00000487908 423 ntBASIC3.67□□□□□ -1.82
HLA-CQ95604 AC018868.1-201ENST00000491307 315 ntBASIC3.67□□□□□ -1.82
HLA-CQ95604 AL033523.1-201ENST00000605153 153 ntBASIC3.67□□□□□ -1.82
HLA-CQ95604 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-CQ95604 AC015726.2-201ENST00000620112 122 ntBASIC3.67□□□□□ -1.82
HLA-CQ95604 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-CQ95604 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-CQ95604 AL442644.1-201ENST00000454390 3105 ntBASIC3.66□□□□□ -1.82
HLA-CQ95604 FAM35CP-201ENST00000554755 2470 ntBASIC3.66□□□□□ -1.82
HLA-CQ95604 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HLA-CQ95604 RN7SKP111-201ENST00000410349 271 ntBASIC3.66□□□□□ -1.82
HLA-CQ95604 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-CQ95604 MIR2114-201ENST00000516645 80 ntBASIC3.66□□□□□ -1.82
HLA-CQ95604 MIR3202-2-201ENST00000635980 79 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms