Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SNORD109B-201ENST00000458961 67 ntBASIC2.47□□□□□ -2.01
SIMC1Q8NDZ2 SNORD65B-201ENST00000459126 73 ntBASIC2.47□□□□□ -2.01
SIMC1Q8NDZ2 SNORD109A-201ENST00000459128 67 ntBASIC2.47□□□□□ -2.01
SIMC1Q8NDZ2 RNU6-1211P-201ENST00000459179 105 ntBASIC2.47□□□□□ -2.01
SIMC1Q8NDZ2 AC114982.1-201ENST00000469402 321 ntBASIC2.47□□□□□ -2.01
SIMC1Q8NDZ2 RNU6-1333P-201ENST00000516162 93 ntBASIC2.47□□□□□ -2.01
SIMC1Q8NDZ2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.47□□□□□ -2.01
SIMC1Q8NDZ2 MIR4529-201ENST00000578110 78 ntBASIC2.47□□□□□ -2.01
SIMC1Q8NDZ2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 AL159152.1-201ENST00000635019 2587 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 SNORA27.1-201ENST00000362604 124 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-728P-201ENST00000365375 104 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 Y_RNA.353-201ENST00000365440 108 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 SNORD116-14-201ENST00000383894 92 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 SNORD116-17-201ENST00000383929 92 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 SNORD116-15-201ENST00000384445 92 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-768P-201ENST00000384683 107 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 SNORD116-19-201ENST00000384729 92 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 RNA5SP210-201ENST00000391034 120 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 RNU2-48P-201ENST00000410694 191 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 AL513328.1-201ENST00000446460 224 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 AC092991.1-201ENST00000477176 376 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 ATP5EP1-201ENST00000510257 156 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 MIR4753-201ENST00000585119 83 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 AP003357.1-201ENST00000604497 148 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 snoZ196.1-201ENST00000625269 89 ntBASIC2.46□□□□□ -2.02
SIMC1Q8NDZ2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 Y_RNA.273-201ENST00000364703 102 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-215P-201ENST00000365169 102 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 MIR539-201ENST00000365690 78 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-1323P-201ENST00000384025 107 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-975P-201ENST00000384296 105 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 MIR1278-201ENST00000408753 81 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 AC016717.1-201ENST00000448918 286 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 snoU13.26-201ENST00000459452 105 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-221P-201ENST00000459541 99 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 AC093259.1-201ENST00000509755 300 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 AC010598.1-201ENST00000510378 103 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 MIR4769-201ENST00000584126 77 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 AL359881.1-201ENST00000602916 267 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 MIR1248-201ENST00000629190 106 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 MIR6844-201ENST00000637122 62 ntBASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SIMC1Q8NDZ2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 AL356292.1-201ENST00000283110 373 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-859P-201ENST00000362728 107 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-271P-201ENST00000363858 105 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 SNORA3A-201ENST00000364113 130 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 MIR9-1-201ENST00000385198 89 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-460P-201ENST00000391158 108 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 RNU4-43P-201ENST00000410628 137 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 RPS26P55-201ENST00000471178 356 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 RPL36AP21-201ENST00000490372 323 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 RNA5SP82-201ENST00000516707 92 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 AC027419.1-201ENST00000522976 328 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 AC127455.1-201ENST00000565496 145 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 MIR3646-201ENST00000578301 84 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 POLR3GP1-201ENST00000594073 261 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 TUG1_4.1-201ENST00000619464 181 ntBASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.44□□□□□ -2.02
SIMC1Q8NDZ2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 RNY1P11-201ENST00000363759 113 ntBASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 RNY3P5-201ENST00000384127 102 ntBASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 Y_RNA.521-201ENST00000384560 114 ntBASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-588P-201ENST00000410281 105 ntBASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-57P-201ENST00000411348 103 ntBASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 RPS27P1-201ENST00000450552 247 ntBASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 RNA5SP20-201ENST00000515976 84 ntBASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 AC005972.2-201ENST00000604690 348 ntBASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.43□□□□□ -2.02
SIMC1Q8NDZ2 SNORD31B-201ENST00000364977 69 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 Y_RNA.393-201ENST00000383936 102 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-80P-201ENST00000384195 107 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-160P-201ENST00000384591 107 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 MIR144-201ENST00000384886 86 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 Y_RNA.622-201ENST00000411091 108 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 AL135786.1-201ENST00000415892 214 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 HMGN2P18-201ENST00000450680 270 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 SNRPGP8-201ENST00000454064 226 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 RPL23AP54-201ENST00000495129 419 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 AC008413.1-201ENST00000511864 177 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms