Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.9□□□□□ -2.11
USP38Q8NB14 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
USP38Q8NB14 AC018630.2-201ENST00000534866 2403 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 SNORD113-8-201ENST00000363497 74 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 Y_RNA.183-201ENST00000363882 113 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 Y_RNA.354-201ENST00000365448 111 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
USP38Q8NB14 RNU11-5P-201ENST00000391216 129 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 AC233266.1-201ENST00000454518 96 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 RNU7-94P-201ENST00000459576 63 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 AC091021.1-201ENST00000468051 388 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 RPS26P45-201ENST00000471748 340 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.89□□□□□ -2.11
USP38Q8NB14 RNU6-1337P-201ENST00000516525 95 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 MIR3145-201ENST00000580727 82 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 MIR4423-201ENST00000580922 80 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 DEFB117-201ENST00000602356 141 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 AL929325.1-201ENST00000603096 117 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 AC242852.1-201ENST00000612151 96 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 AC244015.1-201ENST00000622301 99 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 MIR6079-201ENST00000635807 62 ntBASIC1.89□□□□□ -2.11
USP38Q8NB14 AC100821.1-201ENST00000523153 2479 ntBASIC1.88□□□□□ -2.11
USP38Q8NB14 Y_RNA.152-201ENST00000363578 100 ntBASIC1.88□□□□□ -2.11
USP38Q8NB14 SNORD63-201ENST00000384262 68 ntBASIC1.88□□□□□ -2.11
USP38Q8NB14 AL590004.1-201ENST00000405321 300 ntBASIC1.88□□□□□ -2.11
USP38Q8NB14 AC113618.1-201ENST00000416747 285 ntBASIC1.88□□□□□ -2.11
USP38Q8NB14 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.88□□□□□ -2.11
USP38Q8NB14 SEPT14P8-201ENST00000508026 178 ntBASIC1.88□□□□□ -2.11
USP38Q8NB14 RNU6-1291P-201ENST00000516591 104 ntBASIC1.88□□□□□ -2.11
USP38Q8NB14 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.88□□□□□ -2.11
USP38Q8NB14 AC006504.6-201ENST00000590142 199 ntBASIC1.88□□□□□ -2.11
USP38Q8NB14 AC103810.8-201ENST00000607347 118 ntBASIC1.88□□□□□ -2.11
USP38Q8NB14 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.87□□□□□ -2.11
USP38Q8NB14 RNU4-13P-201ENST00000364019 141 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 Y_RNA.286-201ENST00000364813 102 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 RNU6-342P-201ENST00000384521 104 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
USP38Q8NB14 RNU6-360P-201ENST00000390944 104 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 MIR1267-201ENST00000408723 78 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 RNU6-985P-201ENST00000410182 104 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 POLR2KP2-201ENST00000438155 177 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 RPS27P1-201ENST00000450552 247 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 AL442663.2-201ENST00000554385 511 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 MIR4300-201ENST00000581016 96 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 AL355297.3-201ENST00000604082 446 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 SNORD113-5-201ENST00000607261 78 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 MIR8074-201ENST00000615081 81 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 MIR8054-201ENST00000620877 86 ntBASIC1.87□□□□□ -2.11
USP38Q8NB14 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
USP38Q8NB14 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USP38Q8NB14 MIR96-201ENST00000362288 78 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.19-201ENST00000362462 99 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.178-201ENST00000363832 102 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.326-201ENST00000365176 113 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 RNU6-53P-201ENST00000365367 106 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.422-201ENST00000384054 114 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 RNU6-440P-201ENST00000390882 105 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 RNU6-855P-201ENST00000410395 104 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 RNA5SP511-201ENST00000410487 115 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.621-201ENST00000411065 96 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 MRPS35P2-201ENST00000508242 191 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 AC025465.3-201ENST00000510570 311 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 MIR3618-201ENST00000580330 88 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.812-201ENST00000610788 101 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.784-201ENST00000613803 101 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.787-201ENST00000616522 101 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.780-201ENST00000617336 101 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 Y_RNA.801-201ENST00000619005 101 ntBASIC1.86□□□□□ -2.11
USP38Q8NB14 SNORD114-7-201ENST00000362520 77 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 SNORD81.1-201ENST00000363064 77 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 Y_RNA.153-201ENST00000363615 91 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 SNORA7.1-201ENST00000363750 139 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 RNU1-42P-201ENST00000364033 160 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.85□□□□□ -2.11
USP38Q8NB14 Y_RNA.383-201ENST00000383855 97 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 SNORD116-13-201ENST00000384408 92 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 RNU6-950P-201ENST00000384651 107 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 RNU2-61P-201ENST00000411069 191 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.85□□□□□ -2.11
USP38Q8NB14 ELOCP20-201ENST00000422460 345 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 AC024067.1-201ENST00000426199 223 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 FTH1P12-201ENST00000432137 551 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 AC010655.3-201ENST00000478818 450 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 RNU2-56P-201ENST00000516826 190 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.85□□□□□ -2.11
USP38Q8NB14 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
USP38Q8NB14 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USP38Q8NB14 Y_RNA.105-201ENST00000363182 111 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 Y_RNA.172-201ENST00000363765 102 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 RNU6-770P-201ENST00000363929 105 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 Y_RNA.214-201ENST00000364201 112 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 Y_RNA.265-201ENST00000364677 108 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 RNU6-806P-201ENST00000365147 105 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
USP38Q8NB14 RNU6-710P-201ENST00000410424 105 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 RN7SKP200-201ENST00000410564 320 ntBASIC1.84□□□□□ -2.11
USP38Q8NB14 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.84□□□□□ -2.11
USP38Q8NB14 STAG3L5P-204ENST00000443759 179 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms