Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 Y_RNA.10-201ENST00000362371 110 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 Y_RNA.73-201ENST00000362910 113 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-268P-201ENST00000364174 107 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 Y_RNA.221-201ENST00000364248 96 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 Y_RNA.244-201ENST00000364484 109 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 SNORA14A-201ENST00000364773 135 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 SNORA4.2-201ENST00000365313 147 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-1276P-201ENST00000365372 104 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 Y_RNA.351-201ENST00000365436 96 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 AP000567.1-201ENST00000406413 156 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 RPS12P18-201ENST00000442381 270 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-795P-201ENST00000516323 103 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 RNA5SP367-201ENST00000516557 118 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 AC002984.1-201ENST00000591692 448 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 AC012531.4-201ENST00000616509 177 ntBASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LYSMD3Q7Z3D4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 SNORD14E-201ENST00000364009 85 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-242P-201ENST00000384359 107 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 Y_RNA.507-201ENST00000384500 99 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 RNA5SP293-201ENST00000410527 113 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 SNRPGP14-201ENST00000435400 219 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 RN7SL601P-201ENST00000471221 293 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 SNORA70.19-201ENST00000516717 90 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 SNORA18.7-201ENST00000516910 131 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 IGKV2-26-201ENST00000518305 343 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 AC087741.2-201ENST00000619415 172 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 AC091932.4-201ENST00000623386 200 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 GABRG2-229ENST00000641017 3628 ntBASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LYSMD3Q7Z3D4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 SNORD68-201ENST00000363214 84 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 RNU4-16P-201ENST00000364737 141 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 AC004941.2-201ENST00000427009 228 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 ARF4P2-201ENST00000430209 526 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 RNU7-80P-201ENST00000459562 61 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 AP003484.1-201ENST00000530974 250 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 AP002004.2-201ENST00000531656 154 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 MIR3618-201ENST00000580330 88 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 MIR338-201ENST00000636369 67 ntBASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LYSMD3Q7Z3D4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-170P-201ENST00000362832 104 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-805P-201ENST00000365643 106 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-787P-201ENST00000384032 107 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 MIR218-1-201ENST00000384999 110 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 MIR577-201ENST00000385196 96 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 RN7SKP111-201ENST00000410349 271 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 AC096949.1-201ENST00000412047 152 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 AL161788.1-201ENST00000441805 169 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 RPS27P29-201ENST00000463110 252 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-1041P-201ENST00000516254 102 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 MIR4778-201ENST00000577635 80 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 MIR4694-201ENST00000578534 80 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 MIR3200-201ENST00000580767 85 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 UCA1.1-201ENST00000620952 75 ntBASIC3.41□□□□□ -1.86
LYSMD3Q7Z3D4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.4□□□□□ -1.86
LYSMD3Q7Z3D4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LYSMD3Q7Z3D4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-1084P-201ENST00000362498 107 ntBASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-832P-201ENST00000363319 107 ntBASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 RNU1-23P-201ENST00000363361 144 ntBASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 Y_RNA.155-201ENST00000363632 101 ntBASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 RNU1-33P-201ENST00000364249 162 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms