Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU6-220P-201ENST00000390919 107 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 AC060773.1-201ENST00000421698 310 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 RPS15AP28-201ENST00000435088 386 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 SNORD11-201ENST00000459124 84 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 RNU6-1333P-201ENST00000516162 93 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 RNU7-99P-201ENST00000516271 62 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 RNA5SP76-201ENST00000516277 87 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 SNORA9.3-201ENST00000516383 129 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 RPL23AP91-201ENST00000569211 455 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 MIR4524B-201ENST00000581569 115 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 AL049861.1-201ENST00000603130 150 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 AC120024.3-201ENST00000603167 156 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 AL353149.1-201ENST00000610667 244 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 AC011603.4-201ENST00000611325 277 ntBASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
USPL1Q5W0Q7 snoU2-30.2-201ENST00000362805 70 ntBASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 RNU6-978P-201ENST00000364371 103 ntBASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 RNU6-1138P-201ENST00000365359 106 ntBASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 MIR562-201ENST00000384894 95 ntBASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 RNU4-53P-201ENST00000410828 140 ntBASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 HMGN2P34-201ENST00000437647 269 ntBASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 AC011406.1-201ENST00000512440 370 ntBASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 AL031274.2-201ENST00000599419 203 ntBASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 AC108206.1-201ENST00000570186 4159 ntBASIC3.29□□□□□ -1.88
USPL1Q5W0Q7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 RNU6-834P-201ENST00000362367 110 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 Y_RNA.99-201ENST00000363138 105 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 Y_RNA.796-201ENST00000364268 102 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 Y_RNA.799-201ENST00000364992 102 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 Y_RNA.584-201ENST00000391090 114 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 RNU2-70P-201ENST00000410718 179 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 RNU1-131P-201ENST00000458943 161 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 RNU4-57P-201ENST00000515980 135 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 RN7SKP179-201ENST00000516126 217 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 RNU6-667P-201ENST00000517186 102 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 MIR4635-201ENST00000583759 79 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 JPX_2.1-201ENST00000614161 69 ntBASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.28□□□□□ -1.88
USPL1Q5W0Q7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 Y_RNA.81-201ENST00000362997 102 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 RNU6-1209P-201ENST00000363655 107 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 Y_RNA.242-201ENST00000364473 110 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 MIR27B-201ENST00000385129 97 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 RNU6-460P-201ENST00000391158 108 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 SNORA26.7-201ENST00000391288 122 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 SNORD88.1-201ENST00000408684 91 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 AC018634.1-201ENST00000437554 401 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 OR9P1P-201ENST00000496431 281 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 RNU6-1096P-201ENST00000517089 102 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 AL358944.1-201ENST00000528537 144 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 U4atac.1-201ENST00000618345 95 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
USPL1Q5W0Q7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 MIR515-2-201ENST00000384883 83 ntBASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 MIR515-1-201ENST00000384884 83 ntBASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 RN7SL297P-201ENST00000483161 293 ntBASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 AC018868.1-201ENST00000491307 315 ntBASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 RNU2-56P-201ENST00000516826 190 ntBASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 AL359075.3-201ENST00000613288 217 ntBASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 U4.3-201ENST00000621047 82 ntBASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
USPL1Q5W0Q7 AC018630.2-201ENST00000534866 2403 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 RNU6-1082P-201ENST00000364574 107 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 Y_RNA.261-201ENST00000364631 102 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 Y_RNA.634-201ENST00000364811 113 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 SNORA25B-201ENST00000365507 128 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 MIR627-201ENST00000384979 97 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 RN7SL636P-201ENST00000497504 294 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 Y_RNA.757-201ENST00000578934 114 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 AC073413.2-201ENST00000604332 360 ntBASIC3.25□□□□□ -1.89
USPL1Q5W0Q7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
USPL1Q5W0Q7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USPL1Q5W0Q7 RNU6-915P-201ENST00000364943 103 ntBASIC3.24□□□□□ -1.89
USPL1Q5W0Q7 Y_RNA.353-201ENST00000365440 108 ntBASIC3.24□□□□□ -1.89
USPL1Q5W0Q7 Y_RNA.563-201ENST00000384707 108 ntBASIC3.24□□□□□ -1.89
USPL1Q5W0Q7 RN7SKP192-201ENST00000411291 327 ntBASIC3.24□□□□□ -1.89
USPL1Q5W0Q7 RPL39P40-201ENST00000445481 146 ntBASIC3.24□□□□□ -1.89
USPL1Q5W0Q7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.24□□□□□ -1.89
USPL1Q5W0Q7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
USPL1Q5W0Q7 AC007336.1-201ENST00000576365 3828 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms