Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP46P62068 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
USP46P62068 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
USP46P62068 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
USP46P62068 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
USP46P62068 Y_RNA.99-201ENST00000363138 105 ntBASIC3.71□□□□□ -1.82
USP46P62068 RNU6-160P-201ENST00000384591 107 ntBASIC3.71□□□□□ -1.82
USP46P62068 RNU6-1072P-201ENST00000384703 107 ntBASIC3.71□□□□□ -1.82
USP46P62068 RNU6-443P-201ENST00000384780 107 ntBASIC3.71□□□□□ -1.82
USP46P62068 MIR591-201ENST00000385290 95 ntBASIC3.71□□□□□ -1.82
USP46P62068 SNORD17-201ENST00000390930 237 ntBASIC3.71□□□□□ -1.82
USP46P62068 RNA5SP482-201ENST00000391269 118 ntBASIC3.71□□□□□ -1.82
USP46P62068 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.71□□□□□ -1.82
USP46P62068 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.71□□□□□ -1.82
USP46P62068 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.71□□□□□ -1.82
USP46P62068 MIR4425-201ENST00000580572 84 ntBASIC3.71□□□□□ -1.82
USP46P62068 AC007179.3-201ENST00000604976 235 ntBASIC3.71□□□□□ -1.82
USP46P62068 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.71□□□□□ -1.82
USP46P62068 CEP170P1-201ENST00000502249 4587 ntBASIC3.71□□□□□ -1.82
USP46P62068 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP46P62068 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
USP46P62068 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
USP46P62068 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP46P62068 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
USP46P62068 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP46P62068 RNA5SP42-201ENST00000364278 115 ntBASIC3.7□□□□□ -1.82
USP46P62068 Y_RNA.333-201ENST00000365274 102 ntBASIC3.7□□□□□ -1.82
USP46P62068 SNORA25B-201ENST00000365507 128 ntBASIC3.7□□□□□ -1.82
USP46P62068 Y_RNA.531-201ENST00000384589 121 ntBASIC3.7□□□□□ -1.82
USP46P62068 MIR34B-201ENST00000385076 84 ntBASIC3.7□□□□□ -1.82
USP46P62068 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
USP46P62068 AC245047.3-201ENST00000429428 127 ntBASIC3.7□□□□□ -1.82
USP46P62068 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.7□□□□□ -1.82
USP46P62068 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.7□□□□□ -1.82
USP46P62068 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.7□□□□□ -1.82
USP46P62068 NDUFB9P3-201ENST00000521269 501 ntBASIC3.7□□□□□ -1.82
USP46P62068 AL513534.2-201ENST00000603836 250 ntBASIC3.7□□□□□ -1.82
USP46P62068 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP46P62068 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP46P62068 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
USP46P62068 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.69□□□□□ -1.82
USP46P62068 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
USP46P62068 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP46P62068 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP46P62068 RNA5SP50-201ENST00000363731 107 ntBASIC3.69□□□□□ -1.82
USP46P62068 RN7SKP200-201ENST00000410564 320 ntBASIC3.69□□□□□ -1.82
USP46P62068 RNU6-579P-201ENST00000516879 102 ntBASIC3.69□□□□□ -1.82
USP46P62068 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.69□□□□□ -1.82
USP46P62068 AP003355.3-201ENST00000623465 114 ntBASIC3.69□□□□□ -1.82
USP46P62068 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP46P62068 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.69□□□□□ -1.82
USP46P62068 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
USP46P62068 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.69□□□□□ -1.82
USP46P62068 AC093908.1-201ENST00000623125 8092 ntBASIC3.69□□□□□ -1.82
USP46P62068 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP46P62068 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP46P62068 Y_RNA.507-201ENST00000384500 99 ntBASIC3.68□□□□□ -1.82
USP46P62068 RNU6-220P-201ENST00000390919 107 ntBASIC3.68□□□□□ -1.82
USP46P62068 AL627390.1-201ENST00000396055 340 ntBASIC3.68□□□□□ -1.82
USP46P62068 RNU6-893P-201ENST00000458841 100 ntBASIC3.68□□□□□ -1.82
USP46P62068 RN7SL297P-201ENST00000483161 293 ntBASIC3.68□□□□□ -1.82
USP46P62068 AC007536.1-201ENST00000533382 349 ntBASIC3.68□□□□□ -1.82
USP46P62068 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.68□□□□□ -1.82
USP46P62068 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.68□□□□□ -1.82
USP46P62068 AC078899.2-201ENST00000595282 212 ntBASIC3.68□□□□□ -1.82
USP46P62068 MIR7851-201ENST00000610611 160 ntBASIC3.68□□□□□ -1.82
USP46P62068 RNU1-33P-201ENST00000364249 162 ntBASIC3.67□□□□□ -1.82
USP46P62068 RNA5SP72-201ENST00000364442 117 ntBASIC3.67□□□□□ -1.82
USP46P62068 Y_RNA.241-201ENST00000364470 117 ntBASIC3.67□□□□□ -1.82
USP46P62068 SNORD38C-201ENST00000384381 69 ntBASIC3.67□□□□□ -1.82
USP46P62068 AC113410.1-201ENST00000505029 247 ntBASIC3.67□□□□□ -1.82
USP46P62068 FAM71BP1-201ENST00000604431 523 ntBASIC3.67□□□□□ -1.82
USP46P62068 MIR7153-201ENST00000637758 57 ntBASIC3.67□□□□□ -1.82
USP46P62068 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.67□□□□□ -1.82
USP46P62068 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP46P62068 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.66□□□□□ -1.82
USP46P62068 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP46P62068 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP46P62068 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP46P62068 RNY1P10-201ENST00000363268 113 ntBASIC3.66□□□□□ -1.82
USP46P62068 Y_RNA.155-201ENST00000363632 101 ntBASIC3.66□□□□□ -1.82
USP46P62068 RNU6-283P-201ENST00000364788 107 ntBASIC3.66□□□□□ -1.82
USP46P62068 SNORD21-201ENST00000383953 95 ntBASIC3.66□□□□□ -1.82
USP46P62068 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
USP46P62068 AL035398.1-201ENST00000430869 322 ntBASIC3.66□□□□□ -1.82
USP46P62068 AL606517.2-201ENST00000442855 241 ntBASIC3.66□□□□□ -1.82
USP46P62068 AC114811.1-201ENST00000507207 168 ntBASIC3.66□□□□□ -1.82
USP46P62068 IGKV2-26-201ENST00000518305 343 ntBASIC3.66□□□□□ -1.82
USP46P62068 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.66□□□□□ -1.82
USP46P62068 MIR4738-201ENST00000579134 87 ntBASIC3.66□□□□□ -1.82
USP46P62068 uc_338.25-201ENST00000613756 156 ntBASIC3.66□□□□□ -1.82
USP46P62068 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.66□□□□□ -1.82
USP46P62068 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP46P62068 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
USP46P62068 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.65□□□□□ -1.82
USP46P62068 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
USP46P62068 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP46P62068 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP46P62068 RNU6-163P-201ENST00000384396 106 ntBASIC3.65□□□□□ -1.83
USP46P62068 SNORA11.1-201ENST00000408133 129 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms