Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
EPHA4P54764 ZNF720P1-201ENST00000562403 1939 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
EPHA4P54764 SNORA33-201ENST00000363664 130 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 RNU6-461P-201ENST00000364195 107 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 SNORD114-6-201ENST00000364393 72 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 Y_RNA.265-201ENST00000364677 108 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 Y_RNA.369-201ENST00000365568 117 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 RNU6-756P-201ENST00000383997 107 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 AL117342.1-201ENST00000404861 406 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 BX510359.1-201ENST00000456973 237 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 RPL23AP67-201ENST00000465341 474 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 RN7SL297P-201ENST00000483161 293 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 RNU7-25P-201ENST00000516544 62 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 SNORA70.19-201ENST00000516717 90 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 MIR4778-201ENST00000577635 80 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 AC009831.4-201ENST00000620744 325 ntBASIC3.28□□□□□ -1.88
EPHA4P54764 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
EPHA4P54764 AP006437.1-201ENST00000641440 3685 ntBASIC3.28□□□□□ -1.89
EPHA4P54764 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
EPHA4P54764 RNU1-133P-201ENST00000364867 167 ntBASIC3.27□□□□□ -1.89
EPHA4P54764 SNORA51.5-201ENST00000384126 131 ntBASIC3.27□□□□□ -1.89
EPHA4P54764 AL590004.2-201ENST00000404787 371 ntBASIC3.27□□□□□ -1.89
EPHA4P54764 MIR1289-1-201ENST00000408836 144 ntBASIC3.27□□□□□ -1.89
EPHA4P54764 AL445646.1-201ENST00000431784 216 ntBASIC3.27□□□□□ -1.89
EPHA4P54764 TRBV12-1-201ENST00000479785 344 ntBASIC3.27□□□□□ -1.89
EPHA4P54764 YPEL5P2-201ENST00000605553 359 ntBASIC3.27□□□□□ -1.89
EPHA4P54764 AC022149.2-201ENST00000621061 203 ntBASIC3.27□□□□□ -1.89
EPHA4P54764 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.27□□□□□ -1.89
EPHA4P54764 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
EPHA4P54764 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
EPHA4P54764 RNU6-862P-201ENST00000362804 105 ntBASIC3.26□□□□□ -1.89
EPHA4P54764 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.26□□□□□ -1.89
EPHA4P54764 AC245047.3-201ENST00000429428 127 ntBASIC3.26□□□□□ -1.89
EPHA4P54764 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
EPHA4P54764 SNORD45.4-201ENST00000516629 73 ntBASIC3.26□□□□□ -1.89
EPHA4P54764 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.26□□□□□ -1.89
EPHA4P54764 AC026271.5-201ENST00000577873 130 ntBASIC3.26□□□□□ -1.89
EPHA4P54764 AC021443.1-201ENST00000604478 211 ntBASIC3.26□□□□□ -1.89
EPHA4P54764 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.26□□□□□ -1.89
EPHA4P54764 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
EPHA4P54764 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
EPHA4P54764 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
EPHA4P54764 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
EPHA4P54764 Y_RNA.37-201ENST00000362606 108 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 RNU6-23P-201ENST00000363283 107 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 SNORA63.5-201ENST00000363548 123 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 Y_RNA.454-201ENST00000384224 113 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
EPHA4P54764 U8.17-201ENST00000391292 132 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 AL109933.2-201ENST00000452651 260 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 RNU7-80P-201ENST00000459562 61 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 SNORA18.7-201ENST00000516910 131 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 RN7SKP57-201ENST00000517248 293 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 NDUFB9P3-201ENST00000521269 501 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 IGKV3-31-201ENST00000523109 329 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 MIR5680-201ENST00000577577 84 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 MIR3200-201ENST00000580767 85 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 MIR7112-201ENST00000616126 65 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
EPHA4P54764 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
EPHA4P54764 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.25□□□□□ -1.89
EPHA4P54764 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
EPHA4P54764 RNU6-525P-201ENST00000363685 104 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 RNU6-414P-201ENST00000363705 104 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 RNU6-268P-201ENST00000364174 107 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 RNU6-1014P-201ENST00000383940 103 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 RNY1P6-201ENST00000384193 109 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 Y_RNA.547-201ENST00000384654 119 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 Y_RNA.549-201ENST00000384657 102 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 SNORA80E-201ENST00000384744 137 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 RPL21P3-201ENST00000395517 478 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.24□□□□□ -1.89
EPHA4P54764 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.24□□□□□ -1.89
EPHA4P54764 AC087499.4-201ENST00000448505 178 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 RPL39P34-201ENST00000477141 156 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 RNA5SP281-201ENST00000516504 135 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 RNY4P20-201ENST00000516678 93 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 MIR376A2-201ENST00000636782 80 ntBASIC3.24□□□□□ -1.89
EPHA4P54764 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.24□□□□□ -1.89
EPHA4P54764 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
EPHA4P54764 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
EPHA4P54764 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
EPHA4P54764 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.23□□□□□ -1.89
EPHA4P54764 AC093010.3-201ENST00000570269 15214 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 RNA5SP493-201ENST00000364115 91 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.23□□□□□ -1.89
EPHA4P54764 SNORD38C-201ENST00000384381 69 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 MIR1262-201ENST00000408276 93 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 RNU4-47P-201ENST00000410876 114 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 RN7SL442P-201ENST00000473804 320 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 AC092185.1-201ENST00000491371 97 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 MIR5004-201ENST00000579078 107 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 AC015726.2-201ENST00000620112 122 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 MIR8057-201ENST00000620957 69 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 SNORA50A-202ENST00000629536 136 ntBASIC3.23□□□□□ -1.89
EPHA4P54764 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
EPHA4P54764 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms