Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AL031274.2-201ENST00000599419 203 ntBASIC2.43□□□□□ -2.02
CLK3P49761 AL021707.8-201ENST00000609428 183 ntBASIC2.43□□□□□ -2.02
CLK3P49761 AC006435.5-201ENST00000624486 112 ntBASIC2.43□□□□□ -2.02
CLK3P49761 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLK3P49761 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLK3P49761 AL356292.1-201ENST00000283110 373 ntBASIC2.42□□□□□ -2.02
CLK3P49761 SNORA67.1-201ENST00000364749 141 ntBASIC2.42□□□□□ -2.02
CLK3P49761 Y_RNA.587-201ENST00000391210 103 ntBASIC2.42□□□□□ -2.02
CLK3P49761 RNA5SP184-201ENST00000411071 108 ntBASIC2.42□□□□□ -2.02
CLK3P49761 RNA5SP20-201ENST00000515976 84 ntBASIC2.42□□□□□ -2.02
CLK3P49761 AC079600.2-201ENST00000550076 130 ntBASIC2.42□□□□□ -2.02
CLK3P49761 AC121758.2-201ENST00000553271 193 ntBASIC2.42□□□□□ -2.02
CLK3P49761 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLK3P49761 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CLK3P49761 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLK3P49761 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLK3P49761 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLK3P49761 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLK3P49761 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.41□□□□□ -2.02
CLK3P49761 SNORA25.7-201ENST00000364375 127 ntBASIC2.41□□□□□ -2.02
CLK3P49761 RNU4-41P-201ENST00000364426 143 ntBASIC2.41□□□□□ -2.02
CLK3P49761 RNU6-234P-201ENST00000365229 104 ntBASIC2.41□□□□□ -2.02
CLK3P49761 SNORD14D-201ENST00000384390 87 ntBASIC2.41□□□□□ -2.02
CLK3P49761 Y_RNA.525-201ENST00000384570 113 ntBASIC2.41□□□□□ -2.02
CLK3P49761 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
CLK3P49761 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.41□□□□□ -2.02
CLK3P49761 AL158823.1-201ENST00000418441 478 ntBASIC2.41□□□□□ -2.02
CLK3P49761 AC010531.2-201ENST00000465012 153 ntBASIC2.41□□□□□ -2.02
CLK3P49761 MIR449C-201ENST00000516047 92 ntBASIC2.41□□□□□ -2.02
CLK3P49761 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.41□□□□□ -2.02
CLK3P49761 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.41□□□□□ -2.02
CLK3P49761 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.41□□□□□ -2.02
CLK3P49761 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLK3P49761 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.41□□□□□ -2.02
CLK3P49761 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.4□□□□□ -2.02
CLK3P49761 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLK3P49761 SNORA63.4-201ENST00000362763 126 ntBASIC2.4□□□□□ -2.03
CLK3P49761 RNU6-978P-201ENST00000364371 103 ntBASIC2.4□□□□□ -2.03
CLK3P49761 SNORD31B-201ENST00000364977 69 ntBASIC2.4□□□□□ -2.03
CLK3P49761 RNU6-1080P-201ENST00000383982 107 ntBASIC2.4□□□□□ -2.03
CLK3P49761 RNU6-484P-201ENST00000384016 107 ntBASIC2.4□□□□□ -2.03
CLK3P49761 Y_RNA.432-201ENST00000384087 111 ntBASIC2.4□□□□□ -2.03
CLK3P49761 RNU6-57P-201ENST00000411348 103 ntBASIC2.4□□□□□ -2.03
CLK3P49761 AC009238.1-201ENST00000442165 424 ntBASIC2.4□□□□□ -2.03
CLK3P49761 AL357134.1-201ENST00000445848 426 ntBASIC2.4□□□□□ -2.03
CLK3P49761 AC009237.6-201ENST00000446969 424 ntBASIC2.4□□□□□ -2.03
CLK3P49761 CYCTP-201ENST00000504253 315 ntBASIC2.4□□□□□ -2.03
CLK3P49761 RNA5SP356-201ENST00000515972 94 ntBASIC2.4□□□□□ -2.03
CLK3P49761 RNU6-948P-201ENST00000516374 107 ntBASIC2.4□□□□□ -2.03
CLK3P49761 Y_RNA.692-201ENST00000516627 105 ntBASIC2.4□□□□□ -2.03
CLK3P49761 RNU6-965P-201ENST00000516721 96 ntBASIC2.4□□□□□ -2.03
CLK3P49761 Y_RNA.709-201ENST00000516952 92 ntBASIC2.4□□□□□ -2.03
CLK3P49761 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
CLK3P49761 MIR6129-201ENST00000616087 109 ntBASIC2.4□□□□□ -2.03
CLK3P49761 MIR3914-2-201ENST00000637339 95 ntBASIC2.4□□□□□ -2.03
CLK3P49761 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.4□□□□□ -2.03
CLK3P49761 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
CLK3P49761 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLK3P49761 RNU6-235P-201ENST00000362644 107 ntBASIC2.39□□□□□ -2.03
CLK3P49761 Y_RNA.120-201ENST00000363304 110 ntBASIC2.39□□□□□ -2.03
CLK3P49761 RNU6-755P-201ENST00000364400 103 ntBASIC2.39□□□□□ -2.03
CLK3P49761 Y_RNA.280-201ENST00000364765 112 ntBASIC2.39□□□□□ -2.03
CLK3P49761 RNU6-117P-201ENST00000365415 107 ntBASIC2.39□□□□□ -2.03
CLK3P49761 SNORA72-201ENST00000384339 132 ntBASIC2.39□□□□□ -2.03
CLK3P49761 CYCSP49-201ENST00000420810 319 ntBASIC2.39□□□□□ -2.03
CLK3P49761 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.39□□□□□ -2.03
CLK3P49761 ATP5EP1-201ENST00000510257 156 ntBASIC2.39□□□□□ -2.03
CLK3P49761 RN7SKP132-201ENST00000516001 208 ntBASIC2.39□□□□□ -2.03
CLK3P49761 RNU6-1299P-201ENST00000516316 100 ntBASIC2.39□□□□□ -2.03
CLK3P49761 U6.95-201ENST00000636931 70 ntBASIC2.39□□□□□ -2.03
CLK3P49761 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CLK3P49761 AL391516.1-201ENST00000554380 2449 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RNU4-13P-201ENST00000364019 141 ntBASIC2.38□□□□□ -2.03
CLK3P49761 Y_RNA.294-201ENST00000364916 102 ntBASIC2.38□□□□□ -2.03
CLK3P49761 SNORA25B-201ENST00000365507 128 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RNU6-1235P-201ENST00000384559 107 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RNA5SP511-201ENST00000410487 115 ntBASIC2.38□□□□□ -2.03
CLK3P49761 AC007064.1-201ENST00000412238 351 ntBASIC2.38□□□□□ -2.03
CLK3P49761 AC008134.1-201ENST00000420943 193 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RPS12P2-201ENST00000439728 269 ntBASIC2.38□□□□□ -2.03
CLK3P49761 AC016717.1-201ENST00000448918 286 ntBASIC2.38□□□□□ -2.03
CLK3P49761 AC011753.1-201ENST00000451001 220 ntBASIC2.38□□□□□ -2.03
CLK3P49761 AC016925.1-201ENST00000458303 298 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RNU6-498P-201ENST00000459468 107 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RNU6-772P-201ENST00000516042 105 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RNU6-589P-201ENST00000516485 107 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RNA5SP153-201ENST00000516498 76 ntBASIC2.38□□□□□ -2.03
CLK3P49761 RNU6-63P-201ENST00000516690 95 ntBASIC2.38□□□□□ -2.03
CLK3P49761 AC025647.1-201ENST00000517879 253 ntBASIC2.38□□□□□ -2.03
CLK3P49761 AC027419.1-201ENST00000522976 328 ntBASIC2.38□□□□□ -2.03
CLK3P49761 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.38□□□□□ -2.03
CLK3P49761 AC015720.1-201ENST00000565251 277 ntBASIC2.38□□□□□ -2.03
CLK3P49761 MIR4319-201ENST00000577285 85 ntBASIC2.38□□□□□ -2.03
CLK3P49761 MIR3121-201ENST00000579680 77 ntBASIC2.38□□□□□ -2.03
CLK3P49761 AL049861.1-201ENST00000603130 150 ntBASIC2.38□□□□□ -2.03
CLK3P49761 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
CLK3P49761 SCARNA15.3-201ENST00000626315 122 ntBASIC2.38□□□□□ -2.03
CLK3P49761 SCARNA4.1-201ENST00000628597 123 ntBASIC2.38□□□□□ -2.03
CLK3P49761 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms