Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AL353689.1-201ENST00000438895 199 ntBASIC3.35□□□□□ -1.87
GPC1P35052 AC091153.1-201ENST00000466297 402 ntBASIC3.35□□□□□ -1.87
GPC1P35052 AL163195.1-201ENST00000496941 348 ntBASIC3.35□□□□□ -1.87
GPC1P35052 SNORA67.7-201ENST00000516664 135 ntBASIC3.35□□□□□ -1.87
GPC1P35052 SNORA48.11-201ENST00000517015 89 ntBASIC3.35□□□□□ -1.87
GPC1P35052 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.35□□□□□ -1.87
GPC1P35052 AL355297.2-201ENST00000604792 129 ntBASIC3.35□□□□□ -1.87
GPC1P35052 AC034229.5-201ENST00000624258 185 ntBASIC3.35□□□□□ -1.87
GPC1P35052 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.35□□□□□ -1.87
GPC1P35052 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GPC1P35052 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
GPC1P35052 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GPC1P35052 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
GPC1P35052 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GPC1P35052 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
GPC1P35052 RNU6-497P-201ENST00000365316 104 ntBASIC3.34□□□□□ -1.87
GPC1P35052 SNORA80E-201ENST00000384744 137 ntBASIC3.34□□□□□ -1.87
GPC1P35052 MIR554-201ENST00000384874 96 ntBASIC3.34□□□□□ -1.87
GPC1P35052 MIR95-201ENST00000385072 81 ntBASIC3.34□□□□□ -1.87
GPC1P35052 RNU6-644P-201ENST00000391155 98 ntBASIC3.34□□□□□ -1.87
GPC1P35052 RNU6-972P-201ENST00000391208 107 ntBASIC3.34□□□□□ -1.87
GPC1P35052 MIR1255A-201ENST00000408338 113 ntBASIC3.34□□□□□ -1.87
GPC1P35052 RNU2-63P-201ENST00000410792 194 ntBASIC3.34□□□□□ -1.87
GPC1P35052 AL035423.1-201ENST00000420331 213 ntBASIC3.34□□□□□ -1.87
GPC1P35052 ATP5J2P3-201ENST00000451550 258 ntBASIC3.34□□□□□ -1.87
GPC1P35052 RNU6-667P-201ENST00000517186 102 ntBASIC3.34□□□□□ -1.87
GPC1P35052 MIR3158-1-201ENST00000583596 81 ntBASIC3.34□□□□□ -1.87
GPC1P35052 U7.3-201ENST00000616123 62 ntBASIC3.34□□□□□ -1.87
GPC1P35052 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.34□□□□□ -1.87
GPC1P35052 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
GPC1P35052 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
GPC1P35052 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
GPC1P35052 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GPC1P35052 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GPC1P35052 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GPC1P35052 RNA5SP139-201ENST00000364340 117 ntBASIC3.33□□□□□ -1.88
GPC1P35052 RNA5SP51-201ENST00000364750 119 ntBASIC3.33□□□□□ -1.88
GPC1P35052 MIR592-201ENST00000384959 97 ntBASIC3.33□□□□□ -1.88
GPC1P35052 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
GPC1P35052 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
GPC1P35052 AC087499.4-201ENST00000448505 178 ntBASIC3.33□□□□□ -1.88
GPC1P35052 AL109933.2-201ENST00000452651 260 ntBASIC3.33□□□□□ -1.88
GPC1P35052 RPL39P39-201ENST00000455840 151 ntBASIC3.33□□□□□ -1.88
GPC1P35052 AC023141.11-201ENST00000508864 202 ntBASIC3.33□□□□□ -1.88
GPC1P35052 MIR4762-201ENST00000585261 75 ntBASIC3.33□□□□□ -1.88
GPC1P35052 AC012531.4-201ENST00000616509 177 ntBASIC3.33□□□□□ -1.88
GPC1P35052 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
GPC1P35052 AC025521.1-201ENST00000621624 286 ntBASIC3.33□□□□□ -1.88
GPC1P35052 AC093908.1-201ENST00000623125 8092 ntBASIC3.33□□□□□ -1.88
GPC1P35052 CTSLP2-204ENST00000629029 392 ntBASIC3.33□□□□□ -1.88
GPC1P35052 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GPC1P35052 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
GPC1P35052 GABRG2-229ENST00000641017 3628 ntBASIC3.33□□□□□ -1.88
GPC1P35052 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GPC1P35052 SNORD9-201ENST00000362566 104 ntBASIC3.32□□□□□ -1.88
GPC1P35052 U8.5-201ENST00000364528 136 ntBASIC3.32□□□□□ -1.88
GPC1P35052 Y_RNA.336-201ENST00000365307 109 ntBASIC3.32□□□□□ -1.88
GPC1P35052 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
GPC1P35052 ATP5A1P2-201ENST00000412323 255 ntBASIC3.32□□□□□ -1.88
GPC1P35052 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
GPC1P35052 RN7SKP18-201ENST00000516005 275 ntBASIC3.32□□□□□ -1.88
GPC1P35052 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.32□□□□□ -1.88
GPC1P35052 MIR3618-201ENST00000580330 88 ntBASIC3.32□□□□□ -1.88
GPC1P35052 AC078899.2-201ENST00000595282 212 ntBASIC3.32□□□□□ -1.88
GPC1P35052 AL356280.1-201ENST00000603614 379 ntBASIC3.32□□□□□ -1.88
GPC1P35052 AL353149.1-201ENST00000610667 244 ntBASIC3.32□□□□□ -1.88
GPC1P35052 AC087741.2-201ENST00000619415 172 ntBASIC3.32□□□□□ -1.88
GPC1P35052 MIR3202-2-201ENST00000635980 79 ntBASIC3.32□□□□□ -1.88
GPC1P35052 MIR203B-201ENST00000636080 86 ntBASIC3.32□□□□□ -1.88
GPC1P35052 MIR1255B1-201ENST00000636325 63 ntBASIC3.32□□□□□ -1.88
GPC1P35052 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
GPC1P35052 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
GPC1P35052 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
GPC1P35052 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GPC1P35052 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GPC1P35052 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
GPC1P35052 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GPC1P35052 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GPC1P35052 Y_RNA.73-201ENST00000362910 113 ntBASIC3.31□□□□□ -1.88
GPC1P35052 SNORA62.3-201ENST00000365110 153 ntBASIC3.31□□□□□ -1.88
GPC1P35052 RNU6-242P-201ENST00000384359 107 ntBASIC3.31□□□□□ -1.88
GPC1P35052 RNA5SP171-201ENST00000391071 115 ntBASIC3.31□□□□□ -1.88
GPC1P35052 AL627390.1-201ENST00000396055 340 ntBASIC3.31□□□□□ -1.88
GPC1P35052 RNU6-733P-201ENST00000410759 104 ntBASIC3.31□□□□□ -1.88
GPC1P35052 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.31□□□□□ -1.88
GPC1P35052 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.31□□□□□ -1.88
GPC1P35052 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.31□□□□□ -1.88
GPC1P35052 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
GPC1P35052 AC110768.1-201ENST00000509222 400 ntBASIC3.31□□□□□ -1.88
GPC1P35052 SNORA70.18-201ENST00000516696 98 ntBASIC3.31□□□□□ -1.88
GPC1P35052 SNORA70.19-201ENST00000516717 90 ntBASIC3.31□□□□□ -1.88
GPC1P35052 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
GPC1P35052 AC022149.2-201ENST00000621061 203 ntBASIC3.31□□□□□ -1.88
GPC1P35052 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.31□□□□□ -1.88
GPC1P35052 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GPC1P35052 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.31□□□□□ -1.88
GPC1P35052 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GPC1P35052 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GPC1P35052 RNU6-170P-201ENST00000362832 104 ntBASIC3.3□□□□□ -1.88
GPC1P35052 SNORD114-6-201ENST00000364393 72 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms