Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
VARSP26640 AC008264.2-201ENST00000610193 3731 ntBASIC3.62□□□□□ -1.83
VARSP26640 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
VARSP26640 SNORA73.2-201ENST00000364946 201 ntBASIC3.62□□□□□ -1.83
VARSP26640 Y_RNA.454-201ENST00000384224 113 ntBASIC3.62□□□□□ -1.83
VARSP26640 SNX2P2-201ENST00000424553 323 ntBASIC3.62□□□□□ -1.83
VARSP26640 SNRPGP14-201ENST00000435400 219 ntBASIC3.62□□□□□ -1.83
VARSP26640 AC110768.1-201ENST00000509222 400 ntBASIC3.62□□□□□ -1.83
VARSP26640 SNORA74D-201ENST00000516404 141 ntBASIC3.62□□□□□ -1.83
VARSP26640 SCARNA13-201ENST00000516672 275 ntBASIC3.62□□□□□ -1.83
VARSP26640 MIR4694-201ENST00000578534 80 ntBASIC3.62□□□□□ -1.83
VARSP26640 MIR1255B1-201ENST00000636325 63 ntBASIC3.62□□□□□ -1.83
VARSP26640 MIR338-201ENST00000636369 67 ntBASIC3.62□□□□□ -1.83
VARSP26640 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
VARSP26640 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VARSP26640 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
VARSP26640 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VARSP26640 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
VARSP26640 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VARSP26640 RNA5SP124-201ENST00000362739 110 ntBASIC3.61□□□□□ -1.83
VARSP26640 RNU6-832P-201ENST00000363319 107 ntBASIC3.61□□□□□ -1.83
VARSP26640 RNU6-1125P-201ENST00000363601 107 ntBASIC3.61□□□□□ -1.83
VARSP26640 snoU2-30.1-201ENST00000365012 70 ntBASIC3.61□□□□□ -1.83
VARSP26640 MIR577-201ENST00000385196 96 ntBASIC3.61□□□□□ -1.83
VARSP26640 MIR634-201ENST00000385208 97 ntBASIC3.61□□□□□ -1.83
VARSP26640 RNA5SP323-201ENST00000391094 133 ntBASIC3.61□□□□□ -1.83
VARSP26640 AL451046.2-201ENST00000403074 277 ntBASIC3.61□□□□□ -1.83
VARSP26640 RNU6-733P-201ENST00000410759 104 ntBASIC3.61□□□□□ -1.83
VARSP26640 RPS29P4-201ENST00000414733 161 ntBASIC3.61□□□□□ -1.83
VARSP26640 CKS1BP2-201ENST00000497342 240 ntBASIC3.61□□□□□ -1.83
VARSP26640 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.61□□□□□ -1.83
VARSP26640 RN7SKP18-201ENST00000516005 275 ntBASIC3.61□□□□□ -1.83
VARSP26640 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.61□□□□□ -1.83
VARSP26640 MIR3618-201ENST00000580330 88 ntBASIC3.61□□□□□ -1.83
VARSP26640 MIR548Z-201ENST00000584743 97 ntBASIC3.61□□□□□ -1.83
VARSP26640 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.61□□□□□ -1.83
VARSP26640 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VARSP26640 AL021368.2-201ENST00000606125 5352 ntBASIC3.61□□□□□ -1.83
VARSP26640 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VARSP26640 RNU1-23P-201ENST00000363361 144 ntBASIC3.6□□□□□ -1.83
VARSP26640 RNU6-283P-201ENST00000364788 107 ntBASIC3.6□□□□□ -1.83
VARSP26640 Y_RNA.360-201ENST00000365512 102 ntBASIC3.6□□□□□ -1.83
VARSP26640 RNU6-409P-201ENST00000384114 104 ntBASIC3.6□□□□□ -1.83
VARSP26640 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VARSP26640 RNA5SP424-201ENST00000390988 115 ntBASIC3.6□□□□□ -1.83
VARSP26640 RNU6-1328P-201ENST00000410938 106 ntBASIC3.6□□□□□ -1.83
VARSP26640 AC096949.1-201ENST00000412047 152 ntBASIC3.6□□□□□ -1.83
VARSP26640 AC107083.1-201ENST00000439643 279 ntBASIC3.6□□□□□ -1.83
VARSP26640 AC006483.1-201ENST00000487308 313 ntBASIC3.6□□□□□ -1.83
VARSP26640 SCARNA11.3-201ENST00000517276 130 ntBASIC3.6□□□□□ -1.83
VARSP26640 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.6□□□□□ -1.83
VARSP26640 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.6□□□□□ -1.83
VARSP26640 MIR4738-201ENST00000579134 87 ntBASIC3.6□□□□□ -1.83
VARSP26640 MIR3199-1-201ENST00000582434 88 ntBASIC3.6□□□□□ -1.83
VARSP26640 MIR5195-201ENST00000583555 115 ntBASIC3.6□□□□□ -1.83
VARSP26640 Y_RNA.773-201ENST00000607168 90 ntBASIC3.6□□□□□ -1.83
VARSP26640 MIR5739-201ENST00000619803 80 ntBASIC3.6□□□□□ -1.83
VARSP26640 MIR203B-201ENST00000636080 86 ntBASIC3.6□□□□□ -1.83
VARSP26640 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VARSP26640 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VARSP26640 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VARSP26640 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VARSP26640 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VARSP26640 RNU6-363P-201ENST00000362895 105 ntBASIC3.59□□□□□ -1.83
VARSP26640 RNU6-787P-201ENST00000384032 107 ntBASIC3.59□□□□□ -1.83
VARSP26640 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
VARSP26640 RPL21P3-201ENST00000395517 478 ntBASIC3.59□□□□□ -1.83
VARSP26640 RN7SKP200-201ENST00000410564 320 ntBASIC3.59□□□□□ -1.83
VARSP26640 AC093578.1-201ENST00000415219 368 ntBASIC3.59□□□□□ -1.83
VARSP26640 SNORD45.4-201ENST00000516629 73 ntBASIC3.59□□□□□ -1.83
VARSP26640 MIR5187-201ENST00000583479 76 ntBASIC3.59□□□□□ -1.83
VARSP26640 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.59□□□□□ -1.83
VARSP26640 AC078899.2-201ENST00000595282 212 ntBASIC3.59□□□□□ -1.83
VARSP26640 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VARSP26640 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VARSP26640 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VARSP26640 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.84
VARSP26640 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VARSP26640 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
VARSP26640 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
VARSP26640 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VARSP26640 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VARSP26640 RNU6-661P-201ENST00000362409 107 ntBASIC3.58□□□□□ -1.84
VARSP26640 SNORA8-201ENST00000384574 139 ntBASIC3.58□□□□□ -1.84
VARSP26640 MIR605-201ENST00000385078 83 ntBASIC3.58□□□□□ -1.84
VARSP26640 FO393413.1-201ENST00000402892 195 ntBASIC3.58□□□□□ -1.84
VARSP26640 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.58□□□□□ -1.84
VARSP26640 AC087499.4-201ENST00000448505 178 ntBASIC3.58□□□□□ -1.84
VARSP26640 SNORD105B-201ENST00000458770 79 ntBASIC3.58□□□□□ -1.84
VARSP26640 RNU6-521P-201ENST00000516663 105 ntBASIC3.58□□□□□ -1.84
VARSP26640 SCARNA3-201ENST00000517097 143 ntBASIC3.58□□□□□ -1.84
VARSP26640 MIR4762-201ENST00000585261 75 ntBASIC3.58□□□□□ -1.84
VARSP26640 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.58□□□□□ -1.84
VARSP26640 SNORA50A-202ENST00000629536 136 ntBASIC3.58□□□□□ -1.84
VARSP26640 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
VARSP26640 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
VARSP26640 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VARSP26640 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VARSP26640 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VARSP26640 Y_RNA.190-201ENST00000363964 101 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms