Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RPL39P39-201ENST00000455840 151 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 HMGN1P7-201ENST00000491722 313 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 CYCTP-201ENST00000504253 315 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 MTND3P22-201ENST00000510932 243 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 SNORA40.14-201ENST00000516543 86 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 AC015720.1-201ENST00000565251 277 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 AC092447.9-201ENST00000603395 144 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 AC010205.1-201ENST00000616668 449 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 AC005592.1-201ENST00000566527 1640 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 RNY1-201ENST00000364228 113 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 Y_RNA.462-201ENST00000384268 102 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 MIR891A-201ENST00000401237 79 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 MIR1323-201ENST00000408090 73 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 RNA5SP511-201ENST00000410487 115 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 RNU2-61P-201ENST00000411069 191 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 AL160004.2-201ENST00000432935 350 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 AC055872.1-201ENST00000570978 278 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 AC022441.3-201ENST00000605737 136 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 AL121655.1-201ENST00000605811 308 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 RMST_2.1-201ENST00000617263 136 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 AC027279.3-201ENST00000625055 122 ntBASIC1.45□□□□□ -2.18
CAPN3P20807 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CAPN3P20807 SNORD114-26-201ENST00000363543 72 ntBASIC1.44□□□□□ -2.18
CAPN3P20807 RNU6-60P-201ENST00000364792 103 ntBASIC1.44□□□□□ -2.18
CAPN3P20807 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
CAPN3P20807 SNORA31.4-201ENST00000516049 129 ntBASIC1.44□□□□□ -2.18
CAPN3P20807 Y_RNA.804-201ENST00000615262 101 ntBASIC1.44□□□□□ -2.18
CAPN3P20807 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.44□□□□□ -2.18
CAPN3P20807 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.44□□□□□ -2.18
CAPN3P20807 AL606534.2-204ENST00000635008 178 ntBASIC1.44□□□□□ -2.18
CAPN3P20807 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 RNU6-833P-201ENST00000363486 107 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 RNU4-41P-201ENST00000364426 143 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 RNU6-1175P-201ENST00000365200 107 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 RNU6-163P-201ENST00000384396 106 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 RNU6-1170P-201ENST00000515974 106 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 RNU6-507P-201ENST00000516045 100 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 Y_RNA.714-201ENST00000517065 90 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 AC120024.3-201ENST00000603167 156 ntBASIC1.43□□□□□ -2.18
CAPN3P20807 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CAPN3P20807 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
CAPN3P20807 SNORD68-201ENST00000363214 84 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 Y_RNA.431-201ENST00000384086 102 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 RNU6-939P-201ENST00000384634 107 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 Y_RNA.570-201ENST00000384750 101 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.42□□□□□ -2.18
CAPN3P20807 RNU6-436P-201ENST00000516171 114 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 RNU7-40P-201ENST00000516397 64 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 RNA5SP102-201ENST00000516865 106 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 RNU1-92P-201ENST00000517017 135 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 AC011604.1-201ENST00000545978 196 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 AC093027.1-201ENST00000546698 429 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 AC005972.2-201ENST00000604690 348 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 AC091925.1-201ENST00000623204 462 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 AC068647.2-201ENST00000637380 353 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 AC112487.2-201ENST00000637950 304 ntBASIC1.42□□□□□ -2.18
CAPN3P20807 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 RNU4-50P-201ENST00000364361 141 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 MIR618-201ENST00000385287 98 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 MCFD2P1-201ENST00000417812 300 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.41□□□□□ -2.18
CAPN3P20807 Y_RNA.675-201ENST00000516389 149 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 AL160236.1-201ENST00000556317 195 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.41□□□□□ -2.18
CAPN3P20807 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 AC136443.5-201ENST00000603741 370 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 AL157834.3-201ENST00000615543 103 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
CAPN3P20807 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
CAPN3P20807 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
CAPN3P20807 RNU6-708P-201ENST00000384217 107 ntBASIC1.4□□□□□ -2.19
CAPN3P20807 RNY3P14-201ENST00000384309 102 ntBASIC1.4□□□□□ -2.19
CAPN3P20807 MIR222-201ENST00000384992 110 ntBASIC1.4□□□□□ -2.19
CAPN3P20807 MIR452-201ENST00000385020 85 ntBASIC1.4□□□□□ -2.19
CAPN3P20807 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.4□□□□□ -2.19
CAPN3P20807 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.4□□□□□ -2.19
CAPN3P20807 Z98949.2-201ENST00000440996 144 ntBASIC1.4□□□□□ -2.19
CAPN3P20807 AC093852.1-201ENST00000503587 266 ntBASIC1.4□□□□□ -2.19
CAPN3P20807 MIR5188-201ENST00000583467 113 ntBASIC1.4□□□□□ -2.19
CAPN3P20807 AC011373.1-201ENST00000607270 237 ntBASIC1.4□□□□□ -2.19
CAPN3P20807 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CAPN3P20807 MIRLET7C-201ENST00000362160 84 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 RNU4-73P-201ENST00000363164 141 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 Y_RNA.331-201ENST00000365267 102 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 RNU6-1080P-201ENST00000383982 107 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 Y_RNA.439-201ENST00000384119 94 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 SNORA25-201ENST00000384384 134 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 RNU6-1199P-201ENST00000411249 104 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.39□□□□□ -2.19
CAPN3P20807 AC093850.1-201ENST00000454121 251 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 LINC01399-202ENST00000458450 244 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 U8.20-201ENST00000459445 131 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms