Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMNB1P20700 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMNB1P20700 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMNB1P20700 SNORD114-1-201ENST00000362705 72 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 SNORD114-6-201ENST00000364393 72 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 SNORA25B-201ENST00000365507 128 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 RNU6-1117P-201ENST00000384525 104 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 Y_RNA.587-201ENST00000391210 103 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 RNU4-43P-201ENST00000410628 137 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 CYCSP49-201ENST00000420810 319 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 MTND4LP9-201ENST00000427694 174 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.16□□□□□ -1.9
LMNB1P20700 SNORA4.4-201ENST00000515921 135 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 RNU7-128P-201ENST00000517247 62 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 MIR3616-201ENST00000584070 92 ntBASIC3.16□□□□□ -1.9
LMNB1P20700 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LMNB1P20700 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMNB1P20700 RNY3P5-201ENST00000384127 102 ntBASIC3.15□□□□□ -1.91
LMNB1P20700 RNU6-22P-201ENST00000384355 107 ntBASIC3.15□□□□□ -1.91
LMNB1P20700 RNU6-417P-201ENST00000384712 107 ntBASIC3.15□□□□□ -1.91
LMNB1P20700 MIR561-201ENST00000385216 97 ntBASIC3.15□□□□□ -1.91
LMNB1P20700 AC007064.1-201ENST00000412238 351 ntBASIC3.15□□□□□ -1.91
LMNB1P20700 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.15□□□□□ -1.91
LMNB1P20700 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.15□□□□□ -1.91
LMNB1P20700 AL049861.1-201ENST00000603130 150 ntBASIC3.15□□□□□ -1.91
LMNB1P20700 AL353997.5-201ENST00000618886 171 ntBASIC3.15□□□□□ -1.91
LMNB1P20700 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMNB1P20700 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.14□□□□□ -1.91
LMNB1P20700 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMNB1P20700 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMNB1P20700 SNORA33-201ENST00000363664 130 ntBASIC3.14□□□□□ -1.91
LMNB1P20700 RNU6-376P-201ENST00000384731 106 ntBASIC3.14□□□□□ -1.91
LMNB1P20700 HMGN2P35-201ENST00000412164 270 ntBASIC3.14□□□□□ -1.91
LMNB1P20700 AC092991.1-201ENST00000477176 376 ntBASIC3.14□□□□□ -1.91
LMNB1P20700 AC011406.1-201ENST00000512440 370 ntBASIC3.14□□□□□ -1.91
LMNB1P20700 AC112693.2-201ENST00000556538 232 ntBASIC3.14□□□□□ -1.91
LMNB1P20700 AL365222.1-201ENST00000614661 98 ntBASIC3.14□□□□□ -1.91
LMNB1P20700 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMNB1P20700 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.13□□□□□ -1.91
LMNB1P20700 Y_RNA.203-201ENST00000364106 102 ntBASIC3.13□□□□□ -1.91
LMNB1P20700 RNU1-96P-201ENST00000364163 162 ntBASIC3.13□□□□□ -1.91
LMNB1P20700 RNU6-484P-201ENST00000384016 107 ntBASIC3.13□□□□□ -1.91
LMNB1P20700 RNA5SP496-201ENST00000391240 109 ntBASIC3.13□□□□□ -1.91
LMNB1P20700 MIR1262-201ENST00000408276 93 ntBASIC3.13□□□□□ -1.91
LMNB1P20700 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.13□□□□□ -1.91
LMNB1P20700 AC011604.1-201ENST00000545978 196 ntBASIC3.13□□□□□ -1.91
LMNB1P20700 MIR548AI-201ENST00000579940 88 ntBASIC3.13□□□□□ -1.91
LMNB1P20700 AC073413.2-201ENST00000604332 360 ntBASIC3.13□□□□□ -1.91
LMNB1P20700 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.13□□□□□ -1.91
LMNB1P20700 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMNB1P20700 Y_RNA.796-201ENST00000364268 102 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 Y_RNA.799-201ENST00000364992 102 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 RNU6-1336P-201ENST00000383886 109 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 Y_RNA.420-201ENST00000384043 110 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 RNA5SP467-201ENST00000391274 118 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 MIR513C-201ENST00000401352 84 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 MIR1253-201ENST00000408273 105 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 RNU6-588P-201ENST00000410281 105 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 RNU2-51P-201ENST00000410708 197 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 RPL30P13-201ENST00000418873 348 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 AC010154.1-201ENST00000425857 269 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 RPS29P6-201ENST00000438196 145 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 AL445687.1-201ENST00000439946 251 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LMNB1P20700 SNORD11-201ENST00000459124 84 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 RNU6-1041P-201ENST00000516254 102 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 RNU6-971P-201ENST00000516920 106 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 RPL23AP91-201ENST00000569211 455 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 U6.108-201ENST00000637764 58 ntBASIC3.12□□□□□ -1.91
LMNB1P20700 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMNB1P20700 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMNB1P20700 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMNB1P20700 snoU2-30.2-201ENST00000362805 70 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 Y_RNA.218-201ENST00000364218 104 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 Y_RNA.393-201ENST00000383936 102 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 RNU6-1081P-201ENST00000384537 107 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 Y_RNA.542-201ENST00000384641 111 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 RNU6-460P-201ENST00000391158 108 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 RNU6-1186P-201ENST00000410429 97 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 RNU6-1096P-201ENST00000517089 102 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.11□□□□□ -1.91
LMNB1P20700 MIR4446-201ENST00000578505 67 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 MIR4635-201ENST00000583759 79 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 AC120024.3-201ENST00000603167 156 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 AL449363.1-201ENST00000617815 186 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 MIR338-201ENST00000636369 67 ntBASIC3.11□□□□□ -1.91
LMNB1P20700 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LMNB1P20700 RNU6-199P-201ENST00000362954 107 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 RNU6-1209P-201ENST00000363655 107 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 RNU6-1082P-201ENST00000364574 107 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 Y_RNA.521-201ENST00000384560 114 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 SNORA22C-201ENST00000384614 134 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 SNORA40-201ENST00000388090 126 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 SNORD37.2-201ENST00000391075 66 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 AL512604.1-201ENST00000404812 257 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 AC234781.5-201ENST00000508429 271 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 RNU6-479P-201ENST00000516348 105 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 MIR3605-201ENST00000583214 100 ntBASIC3.1□□□□□ -1.91
LMNB1P20700 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms