Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR1276-201ENST00000408707 83 ntBASIC0.71□□□□□ -2.3
HLA-DPB1P04440 Y_RNA.621-201ENST00000411065 96 ntBASIC0.71□□□□□ -2.3
HLA-DPB1P04440 MTND1P2-201ENST00000430604 821 ntBASIC0.71□□□□□ -2.3
HLA-DPB1P04440 RPL39P39-201ENST00000455840 151 ntBASIC0.71□□□□□ -2.3
HLA-DPB1P04440 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.71□□□□□ -2.3
HLA-DPB1P04440 CYCTP-201ENST00000504253 315 ntBASIC0.71□□□□□ -2.3
HLA-DPB1P04440 PRELID3BP2-201ENST00000605362 201 ntBASIC0.71□□□□□ -2.3
HLA-DPB1P04440 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.71□□□□□ -2.3
HLA-DPB1P04440 AC240442.1-201ENST00000616055 283 ntBASIC0.71□□□□□ -2.3
HLA-DPB1P04440 AC008163.1-202ENST00000636004 2889 ntBASIC0.71□□□□□ -2.3
HLA-DPB1P04440 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HLA-DPB1P04440 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
HLA-DPB1P04440 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.7□□□□□ -2.3
HLA-DPB1P04440 RNU1-93P-201ENST00000364704 169 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 SNORD114-22-201ENST00000365423 72 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 RNU6-708P-201ENST00000384217 107 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 SNORA80D-201ENST00000384488 135 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 RNU2-54P-201ENST00000410299 190 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 Y_RNA.619-201ENST00000410951 90 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.7□□□□□ -2.3
HLA-DPB1P04440 LINC01399-202ENST00000458450 244 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.7□□□□□ -2.3
HLA-DPB1P04440 AC136443.5-201ENST00000603741 370 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 AL391903.3-201ENST00000612158 163 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 AC022306.2-201ENST00000617563 647 ntBASIC0.7□□□□□ -2.3
HLA-DPB1P04440 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
HLA-DPB1P04440 RNU6-20P-201ENST00000384106 107 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 AC245047.8-201ENST00000456455 284 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 RNU7-21P-201ENST00000459430 62 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 RNU6-470P-201ENST00000515954 104 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 RNU6-264P-201ENST00000517134 104 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 AC011604.1-201ENST00000545978 196 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 AC092794.1-201ENST00000612734 582 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 AC138305.3-201ENST00000624988 240 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 AC027279.3-201ENST00000625055 122 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
HLA-DPB1P04440 RNU6-626P-201ENST00000363354 107 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 U8.5-201ENST00000364528 136 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 RNY3P4-201ENST00000384428 101 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 MIR520E-201ENST00000384867 87 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 MIR516B2-201ENST00000385190 85 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 MIR1298-201ENST00000408783 112 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 RNU2-61P-201ENST00000411069 191 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 AC096644.2-201ENST00000429278 159 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 FCF1P4-201ENST00000448326 183 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 CHEK2P4-201ENST00000450340 246 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.68□□□□□ -2.3
HLA-DPB1P04440 RNU6-1012P-201ENST00000516606 109 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.68□□□□□ -2.3
HLA-DPB1P04440 MIR4762-201ENST00000585261 75 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 AC005176.2-201ENST00000596933 147 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 AC211469.2-201ENST00000605461 205 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 U6atac.1-201ENST00000616025 117 ntBASIC0.68□□□□□ -2.3
HLA-DPB1P04440 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.68□□□□□ -2.3
HLA-DPB1P04440 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.68□□□□□ -2.3
HLA-DPB1P04440 Y_RNA.253-201ENST00000364562 112 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 SNORD114-24-201ENST00000365029 72 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 SNORA25.9-201ENST00000365087 128 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 Y_RNA.446-201ENST00000384178 104 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 MIR559-201ENST00000385188 96 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 POLR2J4-204ENST00000418424 324 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 PDCD5P2-201ENST00000507570 312 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 SNORA70.12-201ENST00000516084 153 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 RNU6-559P-201ENST00000516151 98 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 RNU6-436P-201ENST00000516171 114 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 RNU6-155P-201ENST00000516347 100 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.67□□□□□ -2.3
HLA-DPB1P04440 AC136932.1-201ENST00000574771 208 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 MIR4659A-201ENST00000580269 81 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 MIR4661-201ENST00000582720 75 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 MIR5690-201ENST00000583739 73 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 AC006380.1-201ENST00000603598 186 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 MIR6504-201ENST00000613520 61 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 MTND4LP32-201ENST00000636111 270 ntBASIC0.67□□□□□ -2.3
HLA-DPB1P04440 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
HLA-DPB1P04440 SNORA25.3-201ENST00000363205 127 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 RNU6-324P-201ENST00000363957 106 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 MIR452-201ENST00000385020 85 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 MIR522-201ENST00000385071 87 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 SNORD78.2-201ENST00000391076 69 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.66□□□□□ -2.3
HLA-DPB1P04440 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.66□□□□□ -2.3
HLA-DPB1P04440 RNU7-41P-201ENST00000515917 61 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 RNU6-197P-201ENST00000516680 100 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 RNU7-4P-201ENST00000516961 62 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 U2.1-201ENST00000618978 145 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 U6.92-201ENST00000636464 89 ntBASIC0.66□□□□□ -2.3
HLA-DPB1P04440 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
HLA-DPB1P04440 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
HLA-DPB1P04440 Y_RNA.146-201ENST00000363549 102 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.191-201ENST00000363972 113 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.314-201ENST00000365114 102 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 RNU1-36P-201ENST00000365130 165 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms