Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC242852.1-201ENST00000612151 96 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 U2.20-201ENST00000613956 192 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 AC244015.1-201ENST00000622301 99 ntBASIC3.78□□□□□ -1.8
ALDH1A1P00352 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALDH1A1P00352 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.78□□□□□ -1.8
ALDH1A1P00352 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ALDH1A1P00352 AF117829.1-206ENST00000621883 3802 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 Y_RNA.37-201ENST00000362606 108 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 RNU6-776P-201ENST00000364403 104 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 RNU6-1022P-201ENST00000365049 104 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 Y_RNA.440-201ENST00000384120 114 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 SNORA7.4-201ENST00000384249 137 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 RNU6-1018P-201ENST00000516577 106 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 RNU6-1291P-201ENST00000516591 104 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 SNORD36C-201ENST00000516733 66 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 AC103810.1-201ENST00000579873 453 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 MIR4777-201ENST00000583710 86 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 AC022217.4-201ENST00000604389 163 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 AC006441.5-201ENST00000612680 209 ntBASIC3.77□□□□□ -1.81
ALDH1A1P00352 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALDH1A1P00352 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
ALDH1A1P00352 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
ALDH1A1P00352 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALDH1A1P00352 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.76□□□□□ -1.81
ALDH1A1P00352 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.76□□□□□ -1.81
ALDH1A1P00352 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
ALDH1A1P00352 RNU6-363P-201ENST00000362895 105 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 SNORD115-28-201ENST00000363931 81 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 SNORA14A-201ENST00000364773 135 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 RNU6-60P-201ENST00000364792 103 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 MRPL35P3-201ENST00000421557 364 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 FTH1P12-201ENST00000432137 551 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 HMGN2P18-201ENST00000450680 270 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 RNU2-11P-201ENST00000459191 187 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 RNU7-25P-201ENST00000516544 62 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.76□□□□□ -1.81
ALDH1A1P00352 GTF3AP2-201ENST00000557014 266 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 MIR1255B1-201ENST00000636325 63 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 AC018630.2-201ENST00000534866 2403 ntBASIC3.76□□□□□ -1.81
ALDH1A1P00352 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ALDH1A1P00352 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ALDH1A1P00352 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ALDH1A1P00352 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.75□□□□□ -1.81
ALDH1A1P00352 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ALDH1A1P00352 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
ALDH1A1P00352 MIR126-201ENST00000362291 85 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 RNU6-661P-201ENST00000362409 107 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 SNORD115-19-201ENST00000363098 82 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 SNORD115-18-201ENST00000363293 82 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 SNORA71.1-201ENST00000364523 117 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 SNORD115-17-201ENST00000364612 82 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 Y_RNA.454-201ENST00000384224 113 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 Z98941.1-201ENST00000407764 100 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 RNU6-733P-201ENST00000410759 104 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.75□□□□□ -1.81
ALDH1A1P00352 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.75□□□□□ -1.81
ALDH1A1P00352 RNU7-128P-201ENST00000517247 62 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.75□□□□□ -1.81
ALDH1A1P00352 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ALDH1A1P00352 MIR4435-1-201ENST00000582552 80 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ALDH1A1P00352 MIR622-201ENST00000638396 96 ntBASIC3.75□□□□□ -1.81
ALDH1A1P00352 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.75□□□□□ -1.81
ALDH1A1P00352 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ALDH1A1P00352 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ALDH1A1P00352 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ALDH1A1P00352 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 RNU1-72P-201ENST00000362976 153 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 MIR522-201ENST00000385071 87 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 AL357552.1-201ENST00000445254 415 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 RNU7-99P-201ENST00000516271 62 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 Y_RNA.714-201ENST00000517065 90 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 NDUFB9P3-201ENST00000521269 501 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 AC091544.4-201ENST00000555268 342 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 AC110741.2-201ENST00000605278 268 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 Y_RNA.773-201ENST00000607168 90 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 AC002076.2-201ENST00000617362 122 ntBASIC3.74□□□□□ -1.81
ALDH1A1P00352 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ALDH1A1P00352 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
ALDH1A1P00352 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ALDH1A1P00352 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
ALDH1A1P00352 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.73□□□□□ -1.81
ALDH1A1P00352 Y_RNA.155-201ENST00000363632 101 ntBASIC3.73□□□□□ -1.81
ALDH1A1P00352 Y_RNA.426-201ENST00000384068 113 ntBASIC3.73□□□□□ -1.81
ALDH1A1P00352 RNU6-409P-201ENST00000384114 104 ntBASIC3.73□□□□□ -1.81
ALDH1A1P00352 Y_RNA.547-201ENST00000384654 119 ntBASIC3.73□□□□□ -1.81
ALDH1A1P00352 AL138878.1-201ENST00000405131 347 ntBASIC3.73□□□□□ -1.81
ALDH1A1P00352 AP000567.1-201ENST00000406413 156 ntBASIC3.73□□□□□ -1.81
ALDH1A1P00352 MIR1253-201ENST00000408273 105 ntBASIC3.73□□□□□ -1.81
ALDH1A1P00352 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms