Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF40O75150 POLR2J4-204ENST00000418424 324 ntBASIC3.93□□□□□ -1.78
RNF40O75150 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF40O75150 AC022695.1-201ENST00000522089 237 ntBASIC3.93□□□□□ -1.78
RNF40O75150 MIR3186-201ENST00000577404 85 ntBASIC3.93□□□□□ -1.78
RNF40O75150 AL137849.1-201ENST00000604767 169 ntBASIC3.93□□□□□ -1.78
RNF40O75150 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF40O75150 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF40O75150 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF40O75150 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF40O75150 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF40O75150 Y_RNA.4-201ENST00000362333 112 ntBASIC3.92□□□□□ -1.78
RNF40O75150 snoU2-30.1-201ENST00000365012 70 ntBASIC3.92□□□□□ -1.78
RNF40O75150 Y_RNA.336-201ENST00000365307 109 ntBASIC3.92□□□□□ -1.78
RNF40O75150 MIR491-201ENST00000384877 84 ntBASIC3.92□□□□□ -1.78
RNF40O75150 RNU2-48P-201ENST00000410694 191 ntBASIC3.92□□□□□ -1.78
RNF40O75150 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF40O75150 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF40O75150 AL109933.2-201ENST00000452651 260 ntBASIC3.92□□□□□ -1.78
RNF40O75150 MIR1270-201ENST00000459320 83 ntBASIC3.92□□□□□ -1.78
RNF40O75150 U6.105-201ENST00000637379 88 ntBASIC3.92□□□□□ -1.78
RNF40O75150 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF40O75150 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF40O75150 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF40O75150 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF40O75150 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF40O75150 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF40O75150 AL021368.2-201ENST00000606125 5352 ntBASIC3.91□□□□□ -1.78
RNF40O75150 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF40O75150 SNORD116-10-201ENST00000363791 102 ntBASIC3.91□□□□□ -1.78
RNF40O75150 RNA5SP72-201ENST00000364442 117 ntBASIC3.91□□□□□ -1.78
RNF40O75150 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RNF40O75150 AL022718.1-201ENST00000412004 84 ntBASIC3.91□□□□□ -1.78
RNF40O75150 AC009414.1-201ENST00000427200 443 ntBASIC3.91□□□□□ -1.78
RNF40O75150 AL035398.1-201ENST00000430869 322 ntBASIC3.91□□□□□ -1.78
RNF40O75150 SNORA71B-202ENST00000439232 272 ntBASIC3.91□□□□□ -1.78
RNF40O75150 AC006539.3-201ENST00000454258 129 ntBASIC3.91□□□□□ -1.78
RNF40O75150 RNA5SP208-201ENST00000516156 78 ntBASIC3.91□□□□□ -1.78
RNF40O75150 RNU6-991P-201ENST00000516168 107 ntBASIC3.91□□□□□ -1.78
RNF40O75150 SNORA70.24-201ENST00000517233 118 ntBASIC3.91□□□□□ -1.78
RNF40O75150 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF40O75150 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF40O75150 MIR5187-201ENST00000583479 76 ntBASIC3.91□□□□□ -1.78
RNF40O75150 MIR3922-201ENST00000585192 84 ntBASIC3.91□□□□□ -1.78
RNF40O75150 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF40O75150 AC021613.1-201ENST00000623880 111 ntBASIC3.91□□□□□ -1.78
RNF40O75150 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF40O75150 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF40O75150 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.9□□□□□ -1.78
RNF40O75150 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.9□□□□□ -1.78
RNF40O75150 Y_RNA.94-201ENST00000363068 106 ntBASIC3.9□□□□□ -1.79
RNF40O75150 SNORD68-201ENST00000363214 84 ntBASIC3.9□□□□□ -1.79
RNF40O75150 RNU6-652P-201ENST00000365488 107 ntBASIC3.9□□□□□ -1.79
RNF40O75150 MIR95-201ENST00000385072 81 ntBASIC3.9□□□□□ -1.79
RNF40O75150 SNORA7.5-201ENST00000410672 110 ntBASIC3.9□□□□□ -1.79
RNF40O75150 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF40O75150 RN7SL293P-201ENST00000481765 281 ntBASIC3.9□□□□□ -1.79
RNF40O75150 RNU6-998P-201ENST00000515894 101 ntBASIC3.9□□□□□ -1.79
RNF40O75150 RN7SKP18-201ENST00000516005 275 ntBASIC3.9□□□□□ -1.79
RNF40O75150 SNORA74D-201ENST00000516404 141 ntBASIC3.9□□□□□ -1.79
RNF40O75150 SNORD45.4-201ENST00000516629 73 ntBASIC3.9□□□□□ -1.79
RNF40O75150 MIR3200-201ENST00000580767 85 ntBASIC3.9□□□□□ -1.79
RNF40O75150 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.9□□□□□ -1.79
RNF40O75150 MIR548BB-201ENST00000626714 66 ntBASIC3.9□□□□□ -1.79
RNF40O75150 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF40O75150 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RNF40O75150 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RNF40O75150 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
RNF40O75150 AC091564.4-201ENST00000533934 2194 ntBASIC3.9□□□□□ -1.79
RNF40O75150 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF40O75150 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF40O75150 AC073346.2-201ENST00000624724 2058 ntBASIC3.9□□□□□ -1.79
RNF40O75150 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
RNF40O75150 RNU1-105P-201ENST00000363470 161 ntBASIC3.89□□□□□ -1.79
RNF40O75150 RNU6-509P-201ENST00000363519 107 ntBASIC3.89□□□□□ -1.79
RNF40O75150 Y_RNA.299-201ENST00000364973 94 ntBASIC3.89□□□□□ -1.79
RNF40O75150 Y_RNA.607-201ENST00000410597 98 ntBASIC3.89□□□□□ -1.79
RNF40O75150 Y_RNA.611-201ENST00000410682 108 ntBASIC3.89□□□□□ -1.79
RNF40O75150 RNU6-1328P-201ENST00000410938 106 ntBASIC3.89□□□□□ -1.79
RNF40O75150 SNX2P2-201ENST00000424553 323 ntBASIC3.89□□□□□ -1.79
RNF40O75150 ARF4P2-201ENST00000430209 526 ntBASIC3.89□□□□□ -1.79
RNF40O75150 MICF-203ENST00000432679 129 ntBASIC3.89□□□□□ -1.79
RNF40O75150 RPL23AP63-201ENST00000498752 471 ntBASIC3.89□□□□□ -1.79
RNF40O75150 Y_RNA.659-201ENST00000515994 113 ntBASIC3.89□□□□□ -1.79
RNF40O75150 RNU6-1006P-201ENST00000516998 103 ntBASIC3.89□□□□□ -1.79
RNF40O75150 MIR4439-201ENST00000583746 80 ntBASIC3.89□□□□□ -1.79
RNF40O75150 MIR7153-201ENST00000637758 57 ntBASIC3.89□□□□□ -1.79
RNF40O75150 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RNF40O75150 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF40O75150 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
RNF40O75150 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF40O75150 RNU1-23P-201ENST00000363361 144 ntBASIC3.88□□□□□ -1.79
RNF40O75150 RNA5SP51-201ENST00000364750 119 ntBASIC3.88□□□□□ -1.79
RNF40O75150 RNY1P4-201ENST00000384595 115 ntBASIC3.88□□□□□ -1.79
RNF40O75150 RNU4-69P-201ENST00000410677 143 ntBASIC3.88□□□□□ -1.79
RNF40O75150 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.88□□□□□ -1.79
RNF40O75150 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.88□□□□□ -1.79
RNF40O75150 SNORA31.1-201ENST00000515993 133 ntBASIC3.88□□□□□ -1.79
RNF40O75150 SNORA31.5-201ENST00000516190 133 ntBASIC3.88□□□□□ -1.79
RNF40O75150 SCARNA11.3-201ENST00000517276 130 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms