Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC078899.2-201ENST00000595282 212 ntBASIC2.42□□□□□ -2.02
TRIM38O00635 AC022202.1-201ENST00000613515 211 ntBASIC2.42□□□□□ -2.02
TRIM38O00635 MIR3674-201ENST00000636576 68 ntBASIC2.42□□□□□ -2.02
TRIM38O00635 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM38O00635 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM38O00635 RNY1P11-201ENST00000363759 113 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 Y_RNA.172-201ENST00000363765 102 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 Y_RNA.525-201ENST00000384570 113 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 RNA5SP465-201ENST00000391195 109 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 MIR513C-201ENST00000401352 84 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 AL359511.1-201ENST00000402970 211 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 U3.40-201ENST00000408706 208 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 RNA5SP425-201ENST00000410336 112 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 RN7SKP223-201ENST00000410582 62 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 RNA5SP504-201ENST00000410676 117 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 AC234781.5-201ENST00000508429 271 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 AC107027.2-201ENST00000512197 115 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 RN7SKP164-201ENST00000516138 266 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 RNU6-453P-201ENST00000516819 85 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.41□□□□□ -2.02
TRIM38O00635 MIR4529-201ENST00000578110 78 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 AC025754.2-201ENST00000606491 432 ntBASIC2.41□□□□□ -2.02
TRIM38O00635 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TRIM38O00635 U3.8-201ENST00000363675 217 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 RNU6-1048P-201ENST00000364054 107 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 RNU6-80P-201ENST00000384195 107 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 RNU6-1235P-201ENST00000384559 107 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 RNU6-429P-201ENST00000384582 108 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 MIR504-201ENST00000385065 83 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 RNU6-1248P-201ENST00000391096 64 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM38O00635 MTCO1P44-201ENST00000441935 243 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 RNU6-498P-201ENST00000459468 107 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 AC010531.2-201ENST00000465012 153 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 PDCD5P2-201ENST00000507570 312 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 RNU6-659P-201ENST00000516454 104 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 RNU7-193P-201ENST00000516723 65 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 AC109810.1-201ENST00000534066 224 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 AL078604.3-201ENST00000615580 211 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 AC013791.1-201ENST00000616619 62 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 AC134026.1-201ENST00000623249 2239 ntBASIC2.4□□□□□ -2.03
TRIM38O00635 RNU6-1164P-201ENST00000364428 107 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 MIR539-201ENST00000365690 78 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 Y_RNA.415-201ENST00000384012 112 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 RNU6-975P-201ENST00000384296 105 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 MIR626-201ENST00000385032 94 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 RNU6-460P-201ENST00000391158 108 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 AL356320.1-201ENST00000429616 163 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM38O00635 AC092991.1-201ENST00000477176 376 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM38O00635 RNU6-948P-201ENST00000516374 107 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 RNU1-117P-201ENST00000517041 158 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 AC046143.2-201ENST00000609789 160 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 MIR203B-201ENST00000636080 86 ntBASIC2.39□□□□□ -2.03
TRIM38O00635 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
TRIM38O00635 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM38O00635 MIR340-201ENST00000362125 95 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 RNU1-58P-201ENST00000362413 163 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 RNU6-103P-201ENST00000363686 107 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 RNU6-324P-201ENST00000363957 106 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 RNU6-1305P-201ENST00000364353 104 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 RNU6-1310P-201ENST00000384153 107 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 SNORA80E-201ENST00000384744 137 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 RNY4P18-201ENST00000391107 89 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM38O00635 RNU6-237P-201ENST00000515985 71 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 RNU6-856P-201ENST00000516959 98 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 AC136628.3-201ENST00000521868 290 ntBASIC2.38□□□□□ -2.03
TRIM38O00635 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM38O00635 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM38O00635 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM38O00635 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
TRIM38O00635 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM38O00635 RNU6-834P-201ENST00000362367 110 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 Y_RNA.24-201ENST00000362508 103 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 RNA5SP456-201ENST00000364002 114 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 SNORD115-30-201ENST00000364117 82 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 Y_RNA.563-201ENST00000384707 108 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 SNORD23.1-201ENST00000408212 104 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 RNA5SP475-201ENST00000410568 110 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
TRIM38O00635 RNU7-107P-201ENST00000459121 61 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 RNU6-561P-201ENST00000516222 102 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 RNA5SP281-201ENST00000516504 135 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 RNU6-1007P-201ENST00000516586 107 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 AC006380.1-201ENST00000603598 186 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 ZNF702P-202ENST00000434269 1966 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 AC092881.1-201ENST00000638218 2733 ntBASIC2.37□□□□□ -2.03
TRIM38O00635 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM38O00635 MIR21-201ENST00000362134 72 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 Y_RNA.43-201ENST00000362670 111 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 RNU6-199P-201ENST00000362954 107 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 Y_RNA.293-201ENST00000364908 93 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 RNU6-407P-201ENST00000365280 104 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 Y_RNA.337-201ENST00000365312 102 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms