Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 RNU1-95P-201ENST00000516357 160 ntBASIC3.57□□□□□ -1.84
CFAP99D6REC4 RNU1-128P-201ENST00000516704 160 ntBASIC3.57□□□□□ -1.84
CFAP99D6REC4 MIR4738-201ENST00000579134 87 ntBASIC3.57□□□□□ -1.84
CFAP99D6REC4 AC078899.2-201ENST00000595282 212 ntBASIC3.57□□□□□ -1.84
CFAP99D6REC4 MIR7851-201ENST00000610611 160 ntBASIC3.57□□□□□ -1.84
CFAP99D6REC4 AL121772.2-201ENST00000614331 297 ntBASIC3.57□□□□□ -1.84
CFAP99D6REC4 MALAT1.1-201ENST00000618249 95 ntBASIC3.57□□□□□ -1.84
CFAP99D6REC4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.57□□□□□ -1.84
CFAP99D6REC4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.57□□□□□ -1.84
CFAP99D6REC4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CFAP99D6REC4 RNA5SP51-201ENST00000364750 119 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 SNORA62.3-201ENST00000365110 153 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 SNORD21-201ENST00000383953 95 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 RNU6-1104P-201ENST00000384723 104 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 ARF4P2-201ENST00000430209 526 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 RN7SL542P-201ENST00000467147 294 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 RNU2-27P-201ENST00000516185 142 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 AP003327.1-201ENST00000529684 127 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 AL449363.1-201ENST00000617815 186 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 U4atac.1-201ENST00000618345 95 ntBASIC3.56□□□□□ -1.84
CFAP99D6REC4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CFAP99D6REC4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFAP99D6REC4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.55□□□□□ -1.84
CFAP99D6REC4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CFAP99D6REC4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFAP99D6REC4 SNORA5A-201ENST00000384111 134 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 RNU6-820P-201ENST00000384273 107 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 RNU6-816P-201ENST00000390914 107 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 RNU6-1268P-201ENST00000391214 107 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 RNU6-1239P-201ENST00000391310 107 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 RN7SL330P-201ENST00000469709 307 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 DEFB131E-201ENST00000532329 154 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 AC022523.2-201ENST00000561045 150 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 SNORA28-201ENST00000606769 126 ntBASIC3.55□□□□□ -1.84
CFAP99D6REC4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFAP99D6REC4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFAP99D6REC4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CFAP99D6REC4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CFAP99D6REC4 SNORD9-201ENST00000362566 104 ntBASIC3.54□□□□□ -1.84
CFAP99D6REC4 MIR450A2-201ENST00000385022 100 ntBASIC3.54□□□□□ -1.84
CFAP99D6REC4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.54□□□□□ -1.84
CFAP99D6REC4 AC107297.1-201ENST00000459991 176 ntBASIC3.54□□□□□ -1.84
CFAP99D6REC4 RNU2-35P-201ENST00000516446 142 ntBASIC3.54□□□□□ -1.84
CFAP99D6REC4 RNU7-6P-201ENST00000516845 62 ntBASIC3.54□□□□□ -1.84
CFAP99D6REC4 AC062037.1-201ENST00000605302 128 ntBASIC3.54□□□□□ -1.84
CFAP99D6REC4 AC012442.3-202ENST00000636742 206 ntBASIC3.54□□□□□ -1.84
CFAP99D6REC4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CFAP99D6REC4 AC245060.5-201ENST00000610778 3293 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CFAP99D6REC4 Y_RNA.10-201ENST00000362371 110 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 RNA5SP124-201ENST00000362739 110 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 RNA5SP493-201ENST00000364115 91 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 RNY1P7-201ENST00000384743 110 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 MIR23B-201ENST00000384832 97 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 MIR200C-201ENST00000384980 68 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 MIR1262-201ENST00000408276 93 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 AC104332.2-201ENST00000429959 156 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.53□□□□□ -1.84
CFAP99D6REC4 RN7SL601P-201ENST00000471221 293 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 AL049873.1-201ENST00000480540 376 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 FAM71BP1-201ENST00000604431 523 ntBASIC3.53□□□□□ -1.84
CFAP99D6REC4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.52□□□□□ -1.85
CFAP99D6REC4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CFAP99D6REC4 RNU6-461P-201ENST00000364195 107 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 RNU6-283P-201ENST00000364788 107 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 SNORA27-201ENST00000384323 126 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 Y_RNA.507-201ENST00000384500 99 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 RNU7-96P-201ENST00000459535 64 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 RN7SL594P-201ENST00000470590 287 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 SCARNA23-201ENST00000516060 130 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 RN7SKP12-201ENST00000516275 143 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 SNORA67.7-201ENST00000516664 135 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 MIR4429-201ENST00000580105 73 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 MIR3158-1-201ENST00000583596 81 ntBASIC3.52□□□□□ -1.85
CFAP99D6REC4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CFAP99D6REC4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CFAP99D6REC4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CFAP99D6REC4 RNU6-23P-201ENST00000363283 107 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 RNA5SP42-201ENST00000364278 115 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 RNU6-424P-201ENST00000384367 105 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CFAP99D6REC4 RN7SKP200-201ENST00000410564 320 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 SNX2P2-201ENST00000424553 323 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 CYCSP4-201ENST00000429682 331 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 AC091826.1-201ENST00000514065 313 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 AC026403.1-201ENST00000518938 295 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CFAP99D6REC4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 AC027279.3-201ENST00000625055 122 ntBASIC3.51□□□□□ -1.85
CFAP99D6REC4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CFAP99D6REC4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CFAP99D6REC4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.5□□□□□ -1.85
CFAP99D6REC4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CFAP99D6REC4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.5□□□□□ -1.85
CFAP99D6REC4 RNY3P2-201ENST00000362918 102 ntBASIC3.5□□□□□ -1.85
CFAP99D6REC4 RNU6-163P-201ENST00000384396 106 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms