Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 RNU6-975P-201ENST00000384296 105 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
HS3ST4Q9Y661 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 AC016717.1-201ENST00000448918 286 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 SNORD65B-201ENST00000459126 73 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 RNU6-221P-201ENST00000459541 99 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 RN7SL429P-201ENST00000479090 223 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 RN7SL489P-201ENST00000486185 223 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 RN7SL327P-201ENST00000488659 223 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.55□□□□□ -2
HS3ST4Q9Y661 AC010598.1-201ENST00000510378 103 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.55□□□□□ -2
HS3ST4Q9Y661 RNU6-1333P-201ENST00000516162 93 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.55□□□□□ -2
HS3ST4Q9Y661 AL359881.1-201ENST00000602916 267 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 AP003357.1-201ENST00000604497 148 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 RN7SL853P-201ENST00000617250 223 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 MIR6844-201ENST00000637122 62 ntBASIC2.55□□□□□ -2
HS3ST4Q9Y661 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.55□□□□□ -2
HS3ST4Q9Y661 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
HS3ST4Q9Y661 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.54□□□□□ -2
HS3ST4Q9Y661 AL356292.1-201ENST00000283110 373 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 Y_RNA.127-201ENST00000363386 109 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 Y_RNA.261-201ENST00000364631 102 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 RNA5SP205-201ENST00000364653 136 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 RNU6-1323P-201ENST00000384025 107 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 Y_RNA.542-201ENST00000384641 111 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 AL359511.1-201ENST00000402970 211 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 RNU2-48P-201ENST00000410694 191 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 AL513328.1-201ENST00000446460 224 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 RPS27P1-201ENST00000450552 247 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 RPL23AP54-201ENST00000495129 419 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 ATP5EP1-201ENST00000510257 156 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 RNU7-116P-201ENST00000516940 62 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 NDUFA5P6-201ENST00000542110 379 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.54□□□□□ -2
HS3ST4Q9Y661 AC127455.1-201ENST00000565496 145 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 AC005972.2-201ENST00000604690 348 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 MIR1248-201ENST00000629190 106 ntBASIC2.54□□□□□ -2
HS3ST4Q9Y661 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HS3ST4Q9Y661 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HS3ST4Q9Y661 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
HS3ST4Q9Y661 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HS3ST4Q9Y661 ZNF702P-202ENST00000434269 1966 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 Y_RNA.71-201ENST00000362892 104 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 Y_RNA.218-201ENST00000364218 104 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 SNORD31B-201ENST00000364977 69 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 RNU6-438P-201ENST00000365561 103 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 RNY3P5-201ENST00000384127 102 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 RNU6-768P-201ENST00000384683 107 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 Y_RNA.622-201ENST00000411091 108 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 RNA5SP508-201ENST00000411327 119 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.53□□□□□ -2
HS3ST4Q9Y661 RNA5SP20-201ENST00000515976 84 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 RNU6-948P-201ENST00000516374 107 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 CYCSP26-201ENST00000534107 320 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.53□□□□□ -2
HS3ST4Q9Y661 MIR3646-201ENST00000578301 84 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 AC011603.4-201ENST00000611325 277 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 TUG1_4.1-201ENST00000619464 181 ntBASIC2.53□□□□□ -2
HS3ST4Q9Y661 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.53□□□□□ -2
HS3ST4Q9Y661 RNU4-13P-201ENST00000364019 141 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 SNORD116-14-201ENST00000383894 92 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 SNORD116-17-201ENST00000383929 92 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 Y_RNA.393-201ENST00000383936 102 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 SNORD116-15-201ENST00000384445 92 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 SNORA67.4-201ENST00000384688 142 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 SNORD116-19-201ENST00000384729 92 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 SNORA79-201ENST00000408376 140 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 AL135786.1-201ENST00000415892 214 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 RNU6-437P-201ENST00000459408 95 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 RPL36AP21-201ENST00000490372 323 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 RNU6-1234P-201ENST00000516877 103 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 AL031274.2-201ENST00000599419 203 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 AC013412.1-201ENST00000610687 192 ntBASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HS3ST4Q9Y661 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 RNU6-743P-201ENST00000364151 106 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 RNU1-91P-201ENST00000364746 163 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 RNU6-418P-201ENST00000384035 107 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 RNU1-148P-201ENST00000384472 162 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 RNU6-460P-201ENST00000391158 108 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 SRIP3-201ENST00000413200 219 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 AC010154.1-201ENST00000425857 269 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 SNORA4.4-201ENST00000515921 135 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 RNU6-63P-201ENST00000516690 95 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 RNA5SP490-201ENST00000517141 136 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 AC026271.5-201ENST00000577873 130 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 CTSLP2-204ENST00000629029 392 ntBASIC2.51□□□□□ -2.01
HS3ST4Q9Y661 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
HS3ST4Q9Y661 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.5□□□□□ -2.01
HS3ST4Q9Y661 SNORD45.3-201ENST00000363836 72 ntBASIC2.5□□□□□ -2.01
HS3ST4Q9Y661 RNU4-41P-201ENST00000364426 143 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms