Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 AC011406.1-201ENST00000512440 370 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 RNU6-561P-201ENST00000516222 102 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 RNU6-1146P-201ENST00000516282 102 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 SNORD116-25-201ENST00000516517 92 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 MIR5092-201ENST00000583139 88 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 AL449363.1-201ENST00000617815 186 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 U4atac.1-201ENST00000618345 95 ntBASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHA2Q9Y5H9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 RNU6-151P-201ENST00000364158 107 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 RNU1-96P-201ENST00000364163 162 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 Y_RNA.343-201ENST00000365354 112 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 RNU6-728P-201ENST00000365375 104 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 RNU6-81P-201ENST00000365608 104 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 Y_RNA.488-201ENST00000384403 102 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 AL606753.1-201ENST00000427435 87 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 HMGN2P34-201ENST00000437647 269 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 AL353689.1-201ENST00000438895 199 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 RPS4XP11-201ENST00000446897 772 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 TRBV12-1-201ENST00000479785 344 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 SNORD53-201ENST00000579969 78 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 AL021707.8-201ENST00000609428 183 ntBASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHA2Q9Y5H9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 RNA5SP456-201ENST00000364002 114 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 RNU6-818P-201ENST00000364837 108 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 RNU6-643P-201ENST00000384018 107 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 SNORA26.7-201ENST00000391288 122 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 RNU4-43P-201ENST00000410628 137 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 AC009238.1-201ENST00000442165 424 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 RPL39P40-201ENST00000445481 146 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 Z96811.1-201ENST00000445880 108 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 AC009237.6-201ENST00000446969 424 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 RNU1-131P-201ENST00000458943 161 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 DNAJC19P2-201ENST00000593340 302 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 AL929325.1-201ENST00000603096 117 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHA2Q9Y5H9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 RNA5SP289-201ENST00000362332 137 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 SNORA25.6-201ENST00000364121 118 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 RNU4-41P-201ENST00000364426 143 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 Y_RNA.337-201ENST00000365312 102 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 RNU6-417P-201ENST00000384712 107 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 Y_RNA.568-201ENST00000384742 113 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 RNU6-131P-201ENST00000391144 107 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 AL512604.1-201ENST00000404812 257 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 AC092427.1-202ENST00000430569 476 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 AC245102.2-201ENST00000448956 180 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 RNA5SP24-201ENST00000516478 95 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 RNU6-56P-201ENST00000516986 93 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 AL353149.1-201ENST00000610667 244 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 AC064859.1-201ENST00000624741 174 ntBASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
PCDHA2Q9Y5H9 SNORD114-6-201ENST00000364393 72 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 Y_RNA.497-201ENST00000384447 98 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 AL359511.1-201ENST00000402970 211 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 MIR1262-201ENST00000408276 93 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 MIR548I2-201ENST00000408348 149 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 AC006461.1-201ENST00000412637 326 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 RPS29P21-201ENST00000496272 170 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 RNU1-41P-201ENST00000516161 162 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 RNU1-48P-201ENST00000516400 162 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 MIR338-201ENST00000636369 67 ntBASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDHA2Q9Y5H9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 Y_RNA.203-201ENST00000364106 102 ntBASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 EDDM3CP-201ENST00000415977 425 ntBASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 AC104389.3-201ENST00000445629 235 ntBASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 SNRPGP8-201ENST00000454064 226 ntBASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 RNU7-99P-201ENST00000516271 62 ntBASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 RNU7-128P-201ENST00000517247 62 ntBASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 AC011604.1-201ENST00000545978 196 ntBASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 AC007229.1-201ENST00000590455 412 ntBASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHA2Q9Y5H9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
PCDHA2Q9Y5H9 MIR569-201ENST00000385228 96 ntBASIC2.74□□□□□ -1.97
PCDHA2Q9Y5H9 Y_RNA.587-201ENST00000391210 103 ntBASIC2.74□□□□□ -1.97
PCDHA2Q9Y5H9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.74□□□□□ -1.97
PCDHA2Q9Y5H9 RN7SL636P-201ENST00000497504 294 ntBASIC2.74□□□□□ -1.97
PCDHA2Q9Y5H9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHA2Q9Y5H9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHA2Q9Y5H9 MIR548X2-201ENST00000579776 100 ntBASIC2.74□□□□□ -1.97
PCDHA2Q9Y5H9 MIR2681-201ENST00000581814 105 ntBASIC2.74□□□□□ -1.97
PCDHA2Q9Y5H9 MIR3658-201ENST00000636291 56 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms