Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 CTSLP2-204ENST00000629029 392 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 AL356274.2-201ENST00000624379 3752 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 RNU6-862P-201ENST00000362804 105 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 RNU6-23P-201ENST00000363283 107 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 RNU6-755P-201ENST00000364400 103 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 MIR548A2-201ENST00000384956 97 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 MIR29C-201ENST00000385231 88 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 MIRLET7F2-201ENST00000385277 83 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 AC104389.3-201ENST00000445629 235 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 AL049873.1-201ENST00000480540 376 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 RN7SL297P-201ENST00000483161 293 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 RNU5E-3P-201ENST00000515913 68 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 SNORD33.1-201ENST00000516213 88 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 AC068657.1-201ENST00000520807 306 ntBASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXD3Q9UJU5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 RNU6-442P-201ENST00000383968 104 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 SNORD17-201ENST00000390930 237 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 AL021397.1-201ENST00000451806 248 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 Y_RNA.651-201ENST00000459380 103 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 AC025518.1-201ENST00000479856 347 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 RN7SKP19-201ENST00000516016 252 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 RNU7-28P-201ENST00000516759 62 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 MTND5P32-201ENST00000560711 1802 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 AC022217.4-201ENST00000604389 163 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 AC006441.5-201ENST00000612680 209 ntBASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXD3Q9UJU5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 RNU6-1164P-201ENST00000364428 107 ntBASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 SNORD77.3-201ENST00000391113 65 ntBASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 RNA5SP482-201ENST00000391269 118 ntBASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 Y_RNA.630-201ENST00000411370 108 ntBASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 AL109933.2-201ENST00000452651 260 ntBASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 YPEL5P2-201ENST00000605553 359 ntBASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 MIR8057-201ENST00000620957 69 ntBASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXD3Q9UJU5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 SNORD14E-201ENST00000364009 85 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 snoU2-30.1-201ENST00000365012 70 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 Y_RNA.410-201ENST00000383992 113 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 MIR518F-201ENST00000384973 87 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 MIR548A3-201ENST00000385297 97 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 AC099677.2-201ENST00000436385 175 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 AC021205.2-201ENST00000480069 347 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 CYCTP-201ENST00000504253 315 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 AC005786.1-201ENST00000588553 154 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 AC108081.1-201ENST00000604358 221 ntBASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
FOXD3Q9UJU5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 SNORD68-201ENST00000363214 84 ntBASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 RNU6-508P-201ENST00000363231 103 ntBASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 AC245047.3-201ENST00000429428 127 ntBASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 TRBV12-1-201ENST00000479785 344 ntBASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 MIR5197-201ENST00000583721 112 ntBASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 AC134878.1-201ENST00000619901 243 ntBASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 AL021368.2-201ENST00000606125 5352 ntBASIC3.03□□□□□ -1.92
FOXD3Q9UJU5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 SNORA63.4-201ENST00000362763 126 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 Y_RNA.336-201ENST00000365307 109 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 MIR548O-201ENST00000408583 114 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 RNU4-47P-201ENST00000410876 114 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 RPL23AP67-201ENST00000465341 474 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 AC092185.1-201ENST00000491371 97 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 RNU6-781P-201ENST00000516377 101 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 RNU6-1149P-201ENST00000516810 97 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 IGKV2-26-201ENST00000518305 343 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 MIR5680-201ENST00000577577 84 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 MIR4276-201ENST00000584832 70 ntBASIC3.02□□□□□ -1.93
FOXD3Q9UJU5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms