Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNU6-1323P-201ENST00000384025 107 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 Y_RNA.466-201ENST00000384294 113 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 RNU6-750P-201ENST00000390946 107 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 RNA5SP252-201ENST00000391131 119 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 MIR1302-5-201ENST00000408164 150 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 CST9LP2-201ENST00000437612 320 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 RPL39P40-201ENST00000445481 146 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 SNORA31.1-201ENST00000515993 133 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 SNORA31.5-201ENST00000516190 133 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 RNU6-1146P-201ENST00000516282 102 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 RNU6-970P-201ENST00000516312 107 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 RNU6-197P-201ENST00000516680 100 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 AC025647.1-201ENST00000517879 253 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 AC007012.1-201ENST00000567192 175 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 AC005972.2-201ENST00000604690 348 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 SNORA27.1-201ENST00000362604 124 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 Y_RNA.220-201ENST00000364244 109 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 RNU6-484P-201ENST00000384016 107 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 Y_RNA.544-201ENST00000384650 113 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 RNU6-972P-201ENST00000391208 107 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 RNU6-1077P-201ENST00000410506 102 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 RNU2-32P-201ENST00000411193 191 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 SNORD65B-201ENST00000459126 73 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.23□□□□□ -1.89
LMCD1Q9NZU5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 RNY1P10-201ENST00000363268 113 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 RNU6-1014P-201ENST00000383940 103 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 Y_RNA.432-201ENST00000384087 111 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 SNORA70B-201ENST00000384210 135 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 MIR181A2-201ENST00000384863 110 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 AL135786.1-201ENST00000415892 214 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 Z98742.2-201ENST00000431564 187 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 RNU7-14P-201ENST00000459331 62 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 AC090515.1-201ENST00000465295 476 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 RNA5SP281-201ENST00000516504 135 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 SNORA31.21-201ENST00000517180 77 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 AL035470.1-201ENST00000622571 220 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 AC090517.3-201ENST00000625170 141 ntBASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LMCD1Q9NZU5 SNORD114-7-201ENST00000362520 77 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 SNORD32B-201ENST00000364460 84 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNA5SP125-201ENST00000364843 120 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 Y_RNA.323-201ENST00000365157 109 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNU6-1124P-201ENST00000384169 107 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNA5SP496-201ENST00000391240 109 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNA5SP511-201ENST00000410487 115 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 AC016717.1-201ENST00000448918 286 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RPS26P55-201ENST00000471178 356 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RPL39P34-201ENST00000477141 156 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNU1-41P-201ENST00000516161 162 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNU6-1299P-201ENST00000516316 100 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNU6-109P-201ENST00000516364 107 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNU1-48P-201ENST00000516400 162 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNU6-184P-201ENST00000516514 107 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 SNORD59.2-201ENST00000516873 68 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNU7-116P-201ENST00000516940 62 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 AC079598.5-201ENST00000547460 117 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 AL160236.1-201ENST00000556317 195 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 AC008739.2-201ENST00000597006 317 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 RNU6-94P-201ENST00000607728 107 ntBASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
LMCD1Q9NZU5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 MIR1283-1-201ENST00000408494 87 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 RNU6-57P-201ENST00000411348 103 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 RN7SKP101-201ENST00000411376 320 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 CALM2P4-201ENST00000430810 426 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 AC087499.2-201ENST00000432861 149 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 AL031183.1-201ENST00000457667 207 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 AC010598.1-201ENST00000510378 103 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 RNA5SP20-201ENST00000515976 84 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 RNU6-158P-201ENST00000517104 100 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 MIR4753-201ENST00000585119 83 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 RPL17P51-201ENST00000605218 238 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 MALAT1.1-201ENST00000618249 95 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 AL590808.1-201ENST00000618696 141 ntBASIC3.2□□□□□ -1.9
LMCD1Q9NZU5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 RNU6-271P-201ENST00000363858 105 ntBASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 RNU4-13P-201ENST00000364019 141 ntBASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 SNORD18B-201ENST00000365659 72 ntBASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 MIR570-201ENST00000384917 97 ntBASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 MIR590-201ENST00000385008 97 ntBASIC3.19□□□□□ -1.9
LMCD1Q9NZU5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms