Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.602-201ENST00000410535 92 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 AL162725.1-201ENST00000435405 301 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 HSPE1P25-201ENST00000455484 251 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 LINC01399-202ENST00000458450 244 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.638-201ENST00000459374 113 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-496P-201ENST00000516145 99 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 RNY3P15-201ENST00000516297 97 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 SNORA44.1-201ENST00000517031 108 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 DEFB117-201ENST00000602356 141 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.19-201ENST00000362462 99 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 SNORD116-13-201ENST00000384408 92 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-102P-201ENST00000384485 104 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 MIR30A-201ENST00000385092 71 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 RN7SKP200-201ENST00000410564 320 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 AL731563.1-201ENST00000442202 214 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 RNU7-34P-201ENST00000459394 64 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 SNORA31.10-201ENST00000516482 106 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.720-201ENST00000517166 92 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 AC015720.1-201ENST00000565251 277 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 AL929325.1-201ENST00000603096 117 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 MIR8074-201ENST00000615081 81 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 AC092881.1-201ENST00000638218 2733 ntBASIC1.72□□□□□ -2.13
SLC6A13Q9NSD5 SNORA63C-201ENST00000364578 129 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-440P-201ENST00000390882 105 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-855P-201ENST00000410395 104 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 RNA5SP511-201ENST00000410487 115 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 HSPE1P21-201ENST00000438283 308 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 JTBP1-201ENST00000441314 247 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 HMGN2P23-201ENST00000456759 269 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 HMGN1P10-201ENST00000474557 553 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-1096P-201ENST00000517089 102 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 AC004832.4-201ENST00000608952 331 ntBASIC1.71□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.145-201ENST00000363527 102 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.172-201ENST00000363765 102 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.267-201ENST00000364679 109 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-806P-201ENST00000365147 105 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.368-201ENST00000365547 113 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-1031P-201ENST00000384773 107 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 MIR1267-201ENST00000408723 78 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 RPL21P38-201ENST00000418090 167 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 RPS20P10-201ENST00000451209 253 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 AL358944.1-201ENST00000528537 144 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 AP003733.2-201ENST00000529409 171 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 AP002004.2-201ENST00000531656 154 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 MIR3145-201ENST00000580727 82 ntBASIC1.7□□□□□ -2.14
SLC6A13Q9NSD5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.26-201ENST00000362539 101 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.136-201ENST00000363444 102 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 RNU4-13P-201ENST00000364019 141 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-290P-201ENST00000365212 101 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.341-201ENST00000365341 102 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.456-201ENST00000384232 111 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-738P-201ENST00000384531 106 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-136P-201ENST00000384663 107 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-1248P-201ENST00000391096 64 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-1291P-201ENST00000516591 104 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 RNU2-56P-201ENST00000516826 190 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 AL162424.1-201ENST00000602325 221 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 ZNF355P-201ENST00000427301 3216 ntBASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.69□□□□□ -2.14
SLC6A13Q9NSD5 SNORA1B-201ENST00000362535 133 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.64-201ENST00000362845 102 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 snoU2_19.2-201ENST00000363024 80 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 RNU4-80P-201ENST00000363200 141 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 RNA5SP99-201ENST00000364020 114 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.310-201ENST00000365063 113 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-482P-201ENST00000391068 107 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AL034345.1-201ENST00000407768 123 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 RPS4XP11-201ENST00000446897 772 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AC098869.1-201ENST00000481627 292 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AC099513.1-201ENST00000490423 301 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AC110588.1-201ENST00000559699 137 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AC005972.2-201ENST00000604690 348 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 SNORA28-201ENST00000606769 126 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AC021506.2-201ENST00000612354 169 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AC007742.2-201ENST00000618226 398 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 AC100821.1-201ENST00000523153 2479 ntBASIC1.68□□□□□ -2.14
SLC6A13Q9NSD5 MIR424-201ENST00000362227 98 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.418-201ENST00000384029 102 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms