Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CYCSP30-201ENST00000546447 172 ntBASIC3.66□□□□□ -1.82
PRDM9Q9NQV7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.66□□□□□ -1.82
PRDM9Q9NQV7 UCA1.1-201ENST00000620952 75 ntBASIC3.66□□□□□ -1.82
PRDM9Q9NQV7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRDM9Q9NQV7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRDM9Q9NQV7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.65□□□□□ -1.82
PRDM9Q9NQV7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.65□□□□□ -1.82
PRDM9Q9NQV7 RNA5SP295-201ENST00000362655 121 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 RNU1-23P-201ENST00000363361 144 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 RNU6-776P-201ENST00000364403 104 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 RNU6-1022P-201ENST00000365049 104 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 RNU2-48P-201ENST00000410694 191 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 RNU2-40P-201ENST00000410833 196 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 GOT2P5-201ENST00000433995 546 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 RN7SL323P-201ENST00000494712 295 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 Y_RNA.659-201ENST00000515994 113 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 MIR5685-201ENST00000579080 79 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 AL137849.1-201ENST00000604767 169 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 AL161912.2-201ENST00000565707 3007 ntBASIC3.65□□□□□ -1.83
PRDM9Q9NQV7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-34-201ENST00000362441 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-12-201ENST00000362583 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-29-201ENST00000362834 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-9-201ENST00000362912 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-21-201ENST00000362963 81 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-14-201ENST00000363090 81 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-41-201ENST00000363608 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-11-201ENST00000363616 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-5-201ENST00000363633 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-39-201ENST00000363694 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-4-201ENST00000363810 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-6-201ENST00000363942 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-42-201ENST00000364273 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-15-201ENST00000364809 81 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-26-201ENST00000365067 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-10-201ENST00000365073 81 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-43-201ENST00000365503 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-36-201ENST00000365629 82 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORD77B-201ENST00000391112 67 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SNORA3.3-201ENST00000408712 125 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 POLR2J4-204ENST00000418424 324 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 CST2P1-201ENST00000425770 87 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 ATP5J2P3-201ENST00000451550 258 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 RPL23AP63-201ENST00000498752 471 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 AL513534.2-201ENST00000603836 250 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 AC096720.1-201ENST00000604441 183 ntBASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.64□□□□□ -1.83
PRDM9Q9NQV7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 RN7SKP27-201ENST00000410684 333 ntBASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 CKS1BP2-201ENST00000497342 240 ntBASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 AC110079.1-202ENST00000635213 138 ntBASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 AC006160.2-201ENST00000637708 154 ntBASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
PRDM9Q9NQV7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 MIR342-201ENST00000362212 99 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-2-201ENST00000362842 82 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 SNORD115-20-201ENST00000365099 82 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 Y_RNA.430-201ENST00000384081 110 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 MIR30B-201ENST00000384850 88 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 RNU6-788P-201ENST00000390967 104 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 SNORA7.5-201ENST00000410672 110 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 RNU6-1328P-201ENST00000410938 106 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 SRIP3-201ENST00000413200 219 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 MIR3186-201ENST00000577404 85 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 MIR5047-201ENST00000579212 100 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 MIR3199-1-201ENST00000582434 88 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 MIR486-1-201ENST00000612171 68 ntBASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRDM9Q9NQV7 AL442644.1-201ENST00000454390 3105 ntBASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 RNU6-1313P-201ENST00000362622 102 ntBASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 Y_RNA.241-201ENST00000364470 117 ntBASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 PTMAP2-201ENST00000397627 327 ntBASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 RN7SL330P-201ENST00000469709 307 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms