Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RNU6-589P-201ENST00000516485 107 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 MIR378D2-201ENST00000580636 98 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 AC120024.3-201ENST00000603167 156 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 MIR3914-2-201ENST00000637339 95 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CD248Q9HCU0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CD248Q9HCU0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
CD248Q9HCU0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CD248Q9HCU0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CD248Q9HCU0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CD248Q9HCU0 ZNF271P-202ENST00000465539 1970 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 snoU2_19.1-201ENST00000362361 80 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CD248Q9HCU0 SNORA67.4-201ENST00000384688 142 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 MIR586-201ENST00000385035 97 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 AL512604.1-201ENST00000404812 257 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 AC245047.4-201ENST00000433189 144 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 SCARNA3-201ENST00000517097 143 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.82□□□□□ -1.96
CD248Q9HCU0 AP003357.1-201ENST00000604497 148 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.82□□□□□ -1.96
CD248Q9HCU0 AC090115.4-201ENST00000609970 188 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 AC013412.1-201ENST00000610687 192 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 uc_338.14-201ENST00000613162 166 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 U6.95-201ENST00000636931 70 ntBASIC2.82□□□□□ -1.96
CD248Q9HCU0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.81□□□□□ -1.96
CD248Q9HCU0 RNU1-57P-201ENST00000384491 166 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 SNORA12-201ENST00000391162 147 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 MIR873-201ENST00000401120 77 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 MIR1185-2-201ENST00000408687 86 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 RNA5SP181-201ENST00000410246 98 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 RPL23AP7-203ENST00000449021 469 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 SNRPGP8-201ENST00000454064 226 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 RNU6-772P-201ENST00000516042 105 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 RNU6-1337P-201ENST00000516525 95 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.81□□□□□ -1.96
CD248Q9HCU0 RPL17P51-201ENST00000605218 238 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 AL137847.3-201ENST00000611521 109 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 MTND5P32-201ENST00000560711 1802 ntBASIC2.81□□□□□ -1.96
CD248Q9HCU0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CD248Q9HCU0 RNU6-220P-201ENST00000390919 107 ntBASIC2.8□□□□□ -1.96
CD248Q9HCU0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.8□□□□□ -1.96
CD248Q9HCU0 SNORA72.7-201ENST00000516349 94 ntBASIC2.8□□□□□ -1.96
CD248Q9HCU0 Y_RNA.692-201ENST00000516627 105 ntBASIC2.8□□□□□ -1.96
CD248Q9HCU0 MIR3121-201ENST00000579680 77 ntBASIC2.8□□□□□ -1.96
CD248Q9HCU0 POLR3GP1-201ENST00000594073 261 ntBASIC2.8□□□□□ -1.96
CD248Q9HCU0 MIR4679-1-201ENST00000637619 75 ntBASIC2.8□□□□□ -1.96
CD248Q9HCU0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
CD248Q9HCU0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CD248Q9HCU0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CD248Q9HCU0 AL159152.1-201ENST00000635019 2587 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.79□□□□□ -1.96
CD248Q9HCU0 RNU6-859P-201ENST00000362728 107 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 RNU6-1323P-201ENST00000384025 107 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 SNORD116-13-201ENST00000384408 92 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 AL355796.1-201ENST00000406706 323 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 MIR1278-201ENST00000408753 81 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 RN7SKP284-201ENST00000411002 343 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.79□□□□□ -1.96
CD248Q9HCU0 AL121890.1-201ENST00000435457 205 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 AC112771.1-201ENST00000463581 102 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 RPL23AP54-201ENST00000495129 419 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CD248Q9HCU0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 RNU7-116P-201ENST00000516940 62 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 AC108081.1-201ENST00000604358 221 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 AC245884.12-201ENST00000615364 59 ntBASIC2.79□□□□□ -1.96
CD248Q9HCU0 MIR6073-201ENST00000352083 89 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 RNU6-1336P-201ENST00000383886 109 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 RNU6-1080P-201ENST00000383982 107 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 RNU6-147P-201ENST00000383983 107 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 SNORA20B-201ENST00000384220 132 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 SNORA40.5-201ENST00000391061 128 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 RNA5SP496-201ENST00000391240 109 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 U6atac.2-201ENST00000408644 118 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.78□□□□□ -1.96
CD248Q9HCU0 RNU6-437P-201ENST00000459408 95 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 HMGN2P9-201ENST00000476875 229 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 RNU6-197P-201ENST00000516680 100 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 RNA5SP402-201ENST00000517148 110 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 AC133485.4-201ENST00000561835 220 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 AC138907.4-201ENST00000570107 226 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 MIR3199-1-201ENST00000582434 88 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 AC005972.2-201ENST00000604690 348 ntBASIC2.78□□□□□ -1.96
CD248Q9HCU0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CD248Q9HCU0 SNORA27.1-201ENST00000362604 124 ntBASIC2.77□□□□□ -1.97
CD248Q9HCU0 U8.1-201ENST00000362843 134 ntBASIC2.77□□□□□ -1.97
CD248Q9HCU0 RNU6-271P-201ENST00000363858 105 ntBASIC2.77□□□□□ -1.97
CD248Q9HCU0 RNU4-41P-201ENST00000364426 143 ntBASIC2.77□□□□□ -1.97
CD248Q9HCU0 Y_RNA.309-201ENST00000365046 111 ntBASIC2.77□□□□□ -1.97
CD248Q9HCU0 RN7SKP101-201ENST00000411376 320 ntBASIC2.77□□□□□ -1.97
CD248Q9HCU0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.77□□□□□ -1.97
CD248Q9HCU0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.77□□□□□ -1.97
CD248Q9HCU0 AL158147.1-201ENST00000443970 75 ntBASIC2.77□□□□□ -1.97
CD248Q9HCU0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.77□□□□□ -1.97
CD248Q9HCU0 RPL36AP48-201ENST00000485521 314 ntBASIC2.77□□□□□ -1.97
CD248Q9HCU0 RPL36AP21-201ENST00000490372 323 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms