Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.56□□□□□ -2
SSBP3Q9BWW4 AC008885.1-201ENST00000514930 301 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 RNA5SP236-201ENST00000516169 116 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 RNU6-965P-201ENST00000516721 96 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 RN7SKP282-201ENST00000516824 299 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 SNORA31.26-201ENST00000517250 137 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 PRELID2P1-201ENST00000552837 301 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.56□□□□□ -2
SSBP3Q9BWW4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.56□□□□□ -2
SSBP3Q9BWW4 AC090115.4-201ENST00000609970 188 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 AL137067.1-201ENST00000615933 120 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SSBP3Q9BWW4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SSBP3Q9BWW4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.55□□□□□ -2
SSBP3Q9BWW4 MIR22-201ENST00000362190 85 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 Y_RNA.163-201ENST00000363702 113 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 SNORA51.5-201ENST00000384126 131 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 RNU6-1113P-201ENST00000384348 107 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 MIR887-201ENST00000401258 79 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 RN7SKP123-201ENST00000410732 291 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.55□□□□□ -2
SSBP3Q9BWW4 CALM2P4-201ENST00000430810 426 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 COX6CP6-201ENST00000490840 228 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 HMGN1P7-201ENST00000491722 313 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 MRPS17P9-201ENST00000511924 393 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 SCARNA20.6-201ENST00000517251 106 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.55□□□□□ -2
SSBP3Q9BWW4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.55□□□□□ -2
SSBP3Q9BWW4 AC009831.4-201ENST00000620744 325 ntBASIC2.55□□□□□ -2
SSBP3Q9BWW4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSBP3Q9BWW4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.55□□□□□ -2
SSBP3Q9BWW4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSBP3Q9BWW4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SSBP3Q9BWW4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SSBP3Q9BWW4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.54□□□□□ -2
SSBP3Q9BWW4 Y_RNA.49-201ENST00000362714 112 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 SNORD73B-201ENST00000364394 72 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 SNORD24-201ENST00000383884 75 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 SNORD61-201ENST00000384252 73 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 RNU6-905P-201ENST00000384434 107 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 RPL21P3-201ENST00000395517 478 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 SNRPGP10-201ENST00000432323 225 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 RPS15AP28-201ENST00000435088 386 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 AC025750.2-201ENST00000442609 450 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 S100A11P2-201ENST00000467589 312 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 RNU6-1270P-201ENST00000517128 108 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 MIR1248-201ENST00000629190 106 ntBASIC2.54□□□□□ -2
SSBP3Q9BWW4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSBP3Q9BWW4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSBP3Q9BWW4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.54□□□□□ -2
SSBP3Q9BWW4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SSBP3Q9BWW4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.53□□□□□ -2
SSBP3Q9BWW4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SSBP3Q9BWW4 RNU6-888P-201ENST00000363010 101 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 U8.6-201ENST00000364939 135 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 RNU6-294P-201ENST00000364999 102 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 Y_RNA.328-201ENST00000365208 113 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 Y_RNA.348-201ENST00000365403 103 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 RNU6-546P-201ENST00000383991 107 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 RN7SKP220-201ENST00000410611 288 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 HMGN2P32-201ENST00000444648 269 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 AC233266.1-201ENST00000454518 96 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 RN7SL75P-201ENST00000461926 281 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.53□□□□□ -2
SSBP3Q9BWW4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.53□□□□□ -2
SSBP3Q9BWW4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 RNU6-1149P-201ENST00000516810 97 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 AC073413.2-201ENST00000604332 360 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 AC242852.1-201ENST00000612151 96 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 AP001318.4-201ENST00000616637 121 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.53□□□□□ -2
SSBP3Q9BWW4 UCA1.1-201ENST00000620952 75 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 AC244015.1-201ENST00000622301 99 ntBASIC2.53□□□□□ -2
SSBP3Q9BWW4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.53□□□□□ -2
SSBP3Q9BWW4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 AC080128.1-201ENST00000474389 1917 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 AL589743.1-201ENST00000551932 2712 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 SNORA54-201ENST00000384281 123 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 AL590004.2-201ENST00000404787 371 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 AC009414.1-201ENST00000427200 443 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 HMGN2P34-201ENST00000437647 269 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 AP001486.1-201ENST00000463339 476 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 RNU6-693P-201ENST00000516134 107 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 SNORA40.13-201ENST00000516379 120 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 RNA5SP281-201ENST00000516504 135 ntBASIC2.52□□□□□ -2.01
SSBP3Q9BWW4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms