Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL117339.2-201ENST00000430475 180 ntBASIC3.6□□□□□ -1.83
USB1Q9BQ65 AC083863.1-201ENST00000438811 231 ntBASIC3.6□□□□□ -1.83
USB1Q9BQ65 RNU7-96P-201ENST00000459535 64 ntBASIC3.6□□□□□ -1.83
USB1Q9BQ65 AC018868.1-201ENST00000491307 315 ntBASIC3.6□□□□□ -1.83
USB1Q9BQ65 RNU6-998P-201ENST00000515894 101 ntBASIC3.6□□□□□ -1.83
USB1Q9BQ65 MIR6867-201ENST00000610636 67 ntBASIC3.6□□□□□ -1.83
USB1Q9BQ65 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
USB1Q9BQ65 MAPK10-322ENST00000641485 4530 ntBASIC3.6□□□□□ -1.83
USB1Q9BQ65 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
USB1Q9BQ65 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USB1Q9BQ65 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
USB1Q9BQ65 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
USB1Q9BQ65 RNU6-862P-201ENST00000362804 105 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 Y_RNA.190-201ENST00000363964 101 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
USB1Q9BQ65 CD24P4-201ENST00000382840 243 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 RNU6-787P-201ENST00000384032 107 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 SNORA7.5-201ENST00000410672 110 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 AC245047.3-201ENST00000429428 127 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 RNU2-11P-201ENST00000459191 187 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 SNORA31.4-201ENST00000516049 129 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 MIR5588-201ENST00000581890 63 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 uc_338.25-201ENST00000613756 156 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 AC091304.10-201ENST00000641554 121 ntBASIC3.59□□□□□ -1.83
USB1Q9BQ65 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USB1Q9BQ65 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
USB1Q9BQ65 Z83843.1-201ENST00000604070 3685 ntBASIC3.59□□□□□ -1.84
USB1Q9BQ65 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
USB1Q9BQ65 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.58□□□□□ -1.84
USB1Q9BQ65 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
USB1Q9BQ65 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
USB1Q9BQ65 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.58□□□□□ -1.84
USB1Q9BQ65 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
USB1Q9BQ65 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.58□□□□□ -1.84
USB1Q9BQ65 RNA5SP130-201ENST00000364431 114 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 RNU6-979P-201ENST00000383896 107 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 RNU4-69P-201ENST00000410677 143 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 AC006011.1-201ENST00000442758 349 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 RPL23AP63-201ENST00000498752 471 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 AC025554.1-201ENST00000505641 188 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 AC114811.1-201ENST00000507207 168 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 AC025627.2-201ENST00000576220 160 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 MIR5684-201ENST00000585074 65 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 ZNF861P-201ENST00000588126 639 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 MIR8058-201ENST00000615737 89 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 MIR7151-201ENST00000617477 60 ntBASIC3.58□□□□□ -1.84
USB1Q9BQ65 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
USB1Q9BQ65 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USB1Q9BQ65 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USB1Q9BQ65 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.57□□□□□ -1.84
USB1Q9BQ65 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USB1Q9BQ65 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USB1Q9BQ65 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USB1Q9BQ65 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
USB1Q9BQ65 RNU6-160P-201ENST00000384591 107 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 RNU6-679P-201ENST00000391003 106 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 RNU6-279P-201ENST00000391297 101 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 MIR1251-201ENST00000408552 70 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 POLR2J4-204ENST00000418424 324 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 AL353813.1-201ENST00000440700 253 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USB1Q9BQ65 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.57□□□□□ -1.84
USB1Q9BQ65 RNU6-65P-201ENST00000516332 98 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 Y_RNA.705-201ENST00000516862 110 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 AC007536.1-201ENST00000533382 349 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 AC245060.5-201ENST00000610778 3293 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.57□□□□□ -1.84
USB1Q9BQ65 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
USB1Q9BQ65 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
USB1Q9BQ65 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.57□□□□□ -1.84
USB1Q9BQ65 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USB1Q9BQ65 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USB1Q9BQ65 AC092881.1-201ENST00000638218 2733 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 Y_RNA.95-201ENST00000363079 95 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 RNU6-1125P-201ENST00000363601 107 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 SNORA25.6-201ENST00000364121 118 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 SNORD115-35-201ENST00000365122 82 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 RNU6-163P-201ENST00000384396 106 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 AL606517.2-201ENST00000442855 241 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 Y_RNA.659-201ENST00000515994 113 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 RN7SKP18-201ENST00000516005 275 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 AL606490.9-201ENST00000603331 271 ntBASIC3.56□□□□□ -1.84
USB1Q9BQ65 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USB1Q9BQ65 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
USB1Q9BQ65 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.55□□□□□ -1.84
USB1Q9BQ65 AC073346.2-201ENST00000624724 2058 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-34-201ENST00000362441 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-12-201ENST00000362583 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-29-201ENST00000362834 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-9-201ENST00000362912 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-21-201ENST00000362963 81 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-14-201ENST00000363090 81 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-13-201ENST00000363358 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-41-201ENST00000363608 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-11-201ENST00000363616 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-5-201ENST00000363633 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-39-201ENST00000363694 82 ntBASIC3.55□□□□□ -1.84
USB1Q9BQ65 SNORD115-4-201ENST00000363810 82 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms