Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 MIR767-201ENST00000390228 109 ntBASIC3.66□□□□□ -1.82
TRERF1Q96PN7 AC097462.1-201ENST00000514125 324 ntBASIC3.66□□□□□ -1.82
TRERF1Q96PN7 RNA5SP385-201ENST00000515947 110 ntBASIC3.66□□□□□ -1.82
TRERF1Q96PN7 Y_RNA.666-201ENST00000516187 112 ntBASIC3.66□□□□□ -1.82
TRERF1Q96PN7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.66□□□□□ -1.82
TRERF1Q96PN7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.66□□□□□ -1.82
TRERF1Q96PN7 AC013412.1-201ENST00000610687 192 ntBASIC3.66□□□□□ -1.82
TRERF1Q96PN7 JPX_2.1-201ENST00000614161 69 ntBASIC3.66□□□□□ -1.82
TRERF1Q96PN7 MIR2052-201ENST00000636055 55 ntBASIC3.66□□□□□ -1.82
TRERF1Q96PN7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRERF1Q96PN7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRERF1Q96PN7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRERF1Q96PN7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.65□□□□□ -1.82
TRERF1Q96PN7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRERF1Q96PN7 AC002546.1-201ENST00000588041 2504 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
TRERF1Q96PN7 MIR302B-201ENST00000362188 73 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 SNORA7.4-201ENST00000384249 137 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 MIR1255A-201ENST00000408338 113 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 AL513477.1-202ENST00000417061 214 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 EIF4EP4-201ENST00000424916 578 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 CST9LP2-201ENST00000437612 320 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 RNU6-893P-201ENST00000458841 100 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 AC008885.1-201ENST00000514930 301 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 AC109329.2-201ENST00000519658 482 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 AC084364.2-201ENST00000546924 395 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 FAM71BP1-201ENST00000604431 523 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 uc_338.25-201ENST00000613756 156 ntBASIC3.65□□□□□ -1.83
TRERF1Q96PN7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRERF1Q96PN7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRERF1Q96PN7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.65□□□□□ -1.83
TRERF1Q96PN7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TRERF1Q96PN7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRERF1Q96PN7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRERF1Q96PN7 Y_RNA.17-201ENST00000362433 111 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 RNA5SP57-201ENST00000459463 123 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 MRPS36P2-201ENST00000512569 299 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.64□□□□□ -1.83
TRERF1Q96PN7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 RNU7-172P-201ENST00000517125 64 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 EIF4BP1-201ENST00000554881 351 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 MIR4438-201ENST00000585271 93 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.64□□□□□ -1.83
TRERF1Q96PN7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRERF1Q96PN7 AC090517.3-201ENST00000625170 141 ntBASIC3.64□□□□□ -1.83
TRERF1Q96PN7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRERF1Q96PN7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.63□□□□□ -1.83
TRERF1Q96PN7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.63□□□□□ -1.83
TRERF1Q96PN7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TRERF1Q96PN7 Y_RNA.93-201ENST00000363066 109 ntBASIC3.63□□□□□ -1.83
TRERF1Q96PN7 Y_RNA.213-201ENST00000364178 111 ntBASIC3.63□□□□□ -1.83
TRERF1Q96PN7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.63□□□□□ -1.83
TRERF1Q96PN7 RPS26P48-201ENST00000491713 339 ntBASIC3.63□□□□□ -1.83
TRERF1Q96PN7 RNU6-711P-201ENST00000517255 106 ntBASIC3.63□□□□□ -1.83
TRERF1Q96PN7 AC245166.1-201ENST00000521012 253 ntBASIC3.63□□□□□ -1.83
TRERF1Q96PN7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRERF1Q96PN7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRERF1Q96PN7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TRERF1Q96PN7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRERF1Q96PN7 RNA5SP383-201ENST00000362934 120 ntBASIC3.62□□□□□ -1.83
TRERF1Q96PN7 RNU6-944P-201ENST00000364023 107 ntBASIC3.62□□□□□ -1.83
TRERF1Q96PN7 Y_RNA.221-201ENST00000364248 96 ntBASIC3.62□□□□□ -1.83
TRERF1Q96PN7 SNORA63D-201ENST00000364359 132 ntBASIC3.62□□□□□ -1.83
TRERF1Q96PN7 RNU6-234P-201ENST00000365229 104 ntBASIC3.62□□□□□ -1.83
TRERF1Q96PN7 SNORD24-201ENST00000383884 75 ntBASIC3.62□□□□□ -1.83
TRERF1Q96PN7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.62□□□□□ -1.83
TRERF1Q96PN7 RNU6-693P-201ENST00000516134 107 ntBASIC3.62□□□□□ -1.83
TRERF1Q96PN7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.62□□□□□ -1.83
TRERF1Q96PN7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRERF1Q96PN7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TRERF1Q96PN7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRERF1Q96PN7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.61□□□□□ -1.83
TRERF1Q96PN7 Y_RNA.265-201ENST00000364677 108 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 SNORD31B-201ENST00000364977 69 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 RNU6-1240P-201ENST00000365155 104 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 RNU6-1104P-201ENST00000384723 104 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 MIR1294-201ENST00000408503 142 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 SNORA59A-201ENST00000459326 152 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 AC022137.1-201ENST00000483735 151 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 RNU6-948P-201ENST00000516374 107 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 RNU6-1096P-201ENST00000517089 102 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 AC008739.2-201ENST00000597006 317 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 AC006386.2-201ENST00000624491 75 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 AC012005.1-201ENST00000624575 75 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRERF1Q96PN7 AC080128.1-201ENST00000474389 1917 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.61□□□□□ -1.83
TRERF1Q96PN7 AC008264.2-201ENST00000610193 3731 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.61□□□□□ -1.83
TRERF1Q96PN7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.6□□□□□ -1.83
TRERF1Q96PN7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.6□□□□□ -1.83
TRERF1Q96PN7 Y_RNA.290-201ENST00000364879 114 ntBASIC3.6□□□□□ -1.83
TRERF1Q96PN7 SNORA44-201ENST00000384584 132 ntBASIC3.6□□□□□ -1.83
TRERF1Q96PN7 SNORD15B-201ENST00000384714 146 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms