Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MIR1291-201ENST00000627649 87 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 MIR7515-201ENST00000637837 67 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 AC016717.2-201ENST00000609089 5141 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 Z82209.1-201ENST00000422141 2135 ntBASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SH3RF3Q8TEJ3 AC008555.8-201ENST00000623602 2168 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 MIR367-201ENST00000362299 68 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 RNU4-15P-201ENST00000362613 141 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.114-201ENST00000363265 113 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 RNU6-461P-201ENST00000364195 107 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 SNORD58C-201ENST00000365223 64 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 SNORD116-21-201ENST00000384507 92 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 MIRLET7F2-201ENST00000385277 83 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.617-201ENST00000410920 90 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 AC027124.2-201ENST00000428249 105 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 AC117454.1-201ENST00000491120 168 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 RNU7-115P-201ENST00000516433 55 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 RNA5SP281-201ENST00000516504 135 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 RNU2-60P-201ENST00000517290 128 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 MIR378D2-201ENST00000580636 98 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 AC005562.2-201ENST00000618264 111 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SH3RF3Q8TEJ3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 MIR450A1-201ENST00000362262 91 ntBASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 RNU6-508P-201ENST00000363231 103 ntBASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 MIR548B-201ENST00000385247 97 ntBASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 MLLT10P1-201ENST00000418346 262 ntBASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 AL441985.1-201ENST00000457727 251 ntBASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 RNU1-117P-201ENST00000517041 158 ntBASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SH3RF3Q8TEJ3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 U8.2-201ENST00000363156 134 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.120-201ENST00000363304 110 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 SNORD73B-201ENST00000364394 72 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 SNORA18.2-201ENST00000383865 132 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 MIR592-201ENST00000384959 97 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 SNORA36B-201ENST00000410438 131 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 AC245047.4-201ENST00000433189 144 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 AL161651.1-201ENST00000440882 223 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 AC107626.1-201ENST00000471084 183 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 RNU6-781P-201ENST00000516377 101 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 Y_RNA.692-201ENST00000516627 105 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 AC090142.3-201ENST00000519012 385 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 RPL30P11-203ENST00000598995 310 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 MIR548AY-201ENST00000617669 107 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 MIR7157-201ENST00000635801 60 ntBASIC2.84□□□□□ -1.95
SH3RF3Q8TEJ3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 Y_RNA.116-201ENST00000363292 103 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 U3.8-201ENST00000363675 217 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 AL445687.1-201ENST00000439946 251 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 AC133485.4-201ENST00000561835 220 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 AC138907.4-201ENST00000570107 226 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 MIR5006-201ENST00000583027 110 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 MIR3117-201ENST00000584034 78 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 AL021707.8-201ENST00000609428 183 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SH3RF3Q8TEJ3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-32P-201ENST00000383948 107 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-484P-201ENST00000384016 107 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-13P-201ENST00000384248 107 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 SNORD116-13-201ENST00000384408 92 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-905P-201ENST00000384434 107 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-12P-201ENST00000384604 107 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-41P-201ENST00000384741 107 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 MIR548A3-201ENST00000385297 97 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 AL133475.1-201ENST00000404414 305 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RN7SKP223-201ENST00000410582 62 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 snoU13.14-201ENST00000459372 104 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RPS26P45-201ENST00000471748 340 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-237P-201ENST00000515985 71 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-1061P-201ENST00000516530 99 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 RNU2-44P-201ENST00000516795 194 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms