Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.47□□□□□ -2.01
VRK3Q8IV63 SNORA72-201ENST00000384339 132 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 Y_RNA.510-201ENST00000384511 114 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 MIR767-201ENST00000390228 109 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 Y_RNA.584-201ENST00000391090 114 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 RNY4P18-201ENST00000391107 89 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 SNORA79-201ENST00000408376 140 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 RNU6-57P-201ENST00000411348 103 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 AC016909.1-201ENST00000415916 166 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 UBE2DNL-203ENST00000474922 222 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 YWHAEP4-201ENST00000505390 198 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 RAC1P5-201ENST00000512182 576 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 SCARNA17.1-201ENST00000516211 143 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 SCARNA17.2-201ENST00000516334 143 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 RNU6-63P-201ENST00000516690 95 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 SNORA31.15-201ENST00000516771 132 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 SCARNA11.3-201ENST00000517276 130 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.47□□□□□ -2.01
VRK3Q8IV63 CYCSP26-201ENST00000534107 320 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 SCARNA17.4-201ENST00000614296 143 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 AC090517.3-201ENST00000625170 141 ntBASIC2.47□□□□□ -2.01
VRK3Q8IV63 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
VRK3Q8IV63 AC091564.4-201ENST00000533934 2194 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VRK3Q8IV63 RNA5SP68-201ENST00000363885 119 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 RNA5SP139-201ENST00000364340 117 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 RNU6-1235P-201ENST00000384559 107 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 Y_RNA.525-201ENST00000384570 113 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VRK3Q8IV63 AL158823.1-201ENST00000418441 478 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 RPL30P4-201ENST00000429309 333 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 AC245102.2-201ENST00000448956 180 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 RNU6-498P-201ENST00000459468 107 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 RNA5SP153-201ENST00000516498 76 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 RNA5SP148-201ENST00000516527 94 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 RNU2-34P-201ENST00000516534 121 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 MIR4513-201ENST00000581077 86 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 AL031274.2-201ENST00000599419 203 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 AC097639.2-201ENST00000603159 172 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 MIR6817-201ENST00000615588 66 ntBASIC2.46□□□□□ -2.02
VRK3Q8IV63 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VRK3Q8IV63 Y_RNA.120-201ENST00000363304 110 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 RNU4-41P-201ENST00000364426 143 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 RNU6-418P-201ENST00000384035 107 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 Y_RNA.432-201ENST00000384087 111 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 RNU6-1144P-201ENST00000384247 104 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 RNU6-476P-201ENST00000384726 107 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 MIR27B-201ENST00000385129 97 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 RNA5SP354-201ENST00000391247 136 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 AC008134.1-201ENST00000420943 193 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.45□□□□□ -2.02
VRK3Q8IV63 PDCD5P2-201ENST00000507570 312 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.45□□□□□ -2.02
VRK3Q8IV63 SNORD77.4-201ENST00000516158 81 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 AC090142.3-201ENST00000519012 385 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 MIR3914-2-201ENST00000637339 95 ntBASIC2.45□□□□□ -2.02
VRK3Q8IV63 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
VRK3Q8IV63 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.45□□□□□ -2.02
VRK3Q8IV63 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VRK3Q8IV63 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VRK3Q8IV63 SNORA25.7-201ENST00000364375 127 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 RNU6-1240P-201ENST00000365155 104 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 RNU6-1336P-201ENST00000383886 109 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 RNU6-1328P-201ENST00000410938 106 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.44□□□□□ -2.02
VRK3Q8IV63 MTCO1P44-201ENST00000441935 243 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 AL158147.1-201ENST00000443970 75 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 UBBP3-201ENST00000445497 241 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.44□□□□□ -2.02
VRK3Q8IV63 RNU6-1299P-201ENST00000516316 100 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 RNU6-586P-201ENST00000517265 104 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.44□□□□□ -2.02
VRK3Q8IV63 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.44□□□□□ -2.02
VRK3Q8IV63 Y_RNA.757-201ENST00000578934 114 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 MIR5092-201ENST00000583139 88 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 AL929325.1-201ENST00000603096 117 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.44□□□□□ -2.02
VRK3Q8IV63 AC006023.1-201ENST00000603944 259 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 AC110079.1-202ENST00000635213 138 ntBASIC2.44□□□□□ -2.02
VRK3Q8IV63 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
VRK3Q8IV63 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VRK3Q8IV63 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
VRK3Q8IV63 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VRK3Q8IV63 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.43□□□□□ -2.02
VRK3Q8IV63 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
VRK3Q8IV63 RNU1-22P-201ENST00000363334 158 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 Y_RNA.203-201ENST00000364106 102 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 SNORD56.5-201ENST00000364281 72 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 RNU6-755P-201ENST00000364400 103 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
VRK3Q8IV63 U6atac.2-201ENST00000408644 118 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 CYCSP49-201ENST00000420810 319 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 HMGN2P18-201ENST00000450680 270 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 RNU6-589P-201ENST00000516485 107 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 AC027419.1-201ENST00000522976 328 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 MIR3121-201ENST00000579680 77 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 MIR3162-201ENST00000581818 82 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 MIR4672-201ENST00000583126 81 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 AL049861.1-201ENST00000603130 150 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 uc_338.4-201ENST00000616635 176 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms