Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC105272.1-201ENST00000438604 198 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 RPL23AP54-201ENST00000495129 419 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 RNU1-142P-201ENST00000516682 145 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 RNA5SP137-201ENST00000516833 135 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 AC073476.4-201ENST00000628409 72 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 AC073325.2-201ENST00000339545 159 ntBASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 RNU6-597P-201ENST00000365620 102 ntBASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 RNU1-148P-201ENST00000384472 162 ntBASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 RNU7-99P-201ENST00000516271 62 ntBASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 RNU6-63P-201ENST00000516690 95 ntBASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 AC107016.2-201ENST00000547968 190 ntBASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 MIR338-201ENST00000636369 67 ntBASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NPAS4Q8IUM7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 AC096644.4-201ENST00000563417 2912 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 MIR449A-201ENST00000362113 91 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 Y_RNA.43-201ENST00000362670 111 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RNA5SP493-201ENST00000364115 91 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 SNORA72-201ENST00000384339 132 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RNA5SP511-201ENST00000410487 115 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 CST2P1-201ENST00000425770 87 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RPS27P29-201ENST00000463110 252 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RN7SL429P-201ENST00000479090 223 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RN7SL489P-201ENST00000486185 223 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RN7SL327P-201ENST00000488659 223 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RNA5SP170-201ENST00000517150 101 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 AC024995.1-201ENST00000523014 93 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 AC015720.1-201ENST00000565251 277 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 MIR3613-201ENST00000579844 87 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 MIR4425-201ENST00000580572 84 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 AC108081.1-201ENST00000604358 221 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 RN7SL853P-201ENST00000617250 223 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 MIR3914-2-201ENST00000637339 95 ntBASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.24□□□□□ -1.89
NPAS4Q8IUM7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 U8.1-201ENST00000362843 134 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 SNORD114-6-201ENST00000364393 72 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 RNU1-109P-201ENST00000383960 147 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 RNU6-301P-201ENST00000384277 107 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 SNORA40.5-201ENST00000391061 128 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 SNORA79-201ENST00000408376 140 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 RNU6-437P-201ENST00000459408 95 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 RNU7-94P-201ENST00000459576 63 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 RNU6-772P-201ENST00000516042 105 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 RNU6-589P-201ENST00000516485 107 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 MIR4658-201ENST00000584344 65 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
NPAS4Q8IUM7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 RNU1-58P-201ENST00000362413 163 ntBASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 RNU1-96P-201ENST00000364163 162 ntBASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 RNU4-41P-201ENST00000364426 143 ntBASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 RNU5E-3P-201ENST00000515913 68 ntBASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 RN7SKP132-201ENST00000516001 208 ntBASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 MIR4319-201ENST00000577285 85 ntBASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 MIR4679-2-201ENST00000578358 77 ntBASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 Y_RNA.757-201ENST00000578934 114 ntBASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 AC073413.2-201ENST00000604332 360 ntBASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS4Q8IUM7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 RNU6-1255P-201ENST00000363434 112 ntBASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 RNU6-755P-201ENST00000364400 103 ntBASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 RNA5SP184-201ENST00000411071 108 ntBASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 Y_RNA.630-201ENST00000411370 108 ntBASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 AC245047.4-201ENST00000433189 144 ntBASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 MIR2681-201ENST00000581814 105 ntBASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 AC005786.1-201ENST00000588553 154 ntBASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 AL049861.1-201ENST00000603130 150 ntBASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS4Q8IUM7 VTRNA1-1-201ENST00000363120 99 ntBASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 RNU6-978P-201ENST00000364371 103 ntBASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 RNU6-1164P-201ENST00000364428 107 ntBASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 RNA5SP126-201ENST00000365092 109 ntBASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.2□□□□□ -1.9
NPAS4Q8IUM7 RNU6-197P-201ENST00000516680 100 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 392.2 ms