Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC096725.1-201ENST00000514266 313 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 RNA5SP217-201ENST00000515959 91 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 RNU6-1270P-201ENST00000517128 108 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDH1Q08174 AL358944.1-201ENST00000528537 144 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH1Q08174 MIR4506-201ENST00000584693 77 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 AL353149.1-201ENST00000610667 244 ntBASIC3.11□□□□□ -1.91
PCDH1Q08174 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDH1Q08174 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDH1Q08174 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH1Q08174 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PCDH1Q08174 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH1Q08174 Y_RNA.35-201ENST00000362601 101 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 RNU6-1164P-201ENST00000364428 107 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 SNORA9-201ENST00000384215 133 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 SNORD61-201ENST00000384252 73 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 SNORD72-201ENST00000390994 80 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 SNORA11.2-201ENST00000408318 127 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 SRIP3-201ENST00000413200 219 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH1Q08174 AC003685.2-201ENST00000422795 395 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 RNU1-142P-201ENST00000516682 145 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 AC025166.1-201ENST00000612411 163 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDH1Q08174 U6.108-201ENST00000637764 58 ntBASIC3.1□□□□□ -1.91
PCDH1Q08174 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH1Q08174 RNU6-1298P-201ENST00000362456 101 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 RNU6-888P-201ENST00000363010 101 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 Y_RNA.242-201ENST00000364473 110 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 RNA5SP267-201ENST00000364893 126 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 RNU6-147P-201ENST00000383983 107 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 RNU4-47P-201ENST00000410876 114 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 AL021397.1-201ENST00000451806 248 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDH1Q08174 RNA5SP236-201ENST00000516169 116 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 MIR4679-2-201ENST00000578358 77 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 AC087685.1-201ENST00000587507 141 ntBASIC3.09□□□□□ -1.91
PCDH1Q08174 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDH1Q08174 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDH1Q08174 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDH1Q08174 AL035425.3-201ENST00000564206 4996 ntBASIC3.09□□□□□ -1.92
PCDH1Q08174 ZNF271P-202ENST00000465539 1970 ntBASIC3.09□□□□□ -1.92
PCDH1Q08174 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
PCDH1Q08174 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDH1Q08174 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
PCDH1Q08174 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDH1Q08174 MIR126-201ENST00000362291 85 ntBASIC3.08□□□□□ -1.92
PCDH1Q08174 SNORA7.4-201ENST00000384249 137 ntBASIC3.08□□□□□ -1.92
PCDH1Q08174 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCDH1Q08174 RPL21P3-201ENST00000395517 478 ntBASIC3.08□□□□□ -1.92
PCDH1Q08174 Y_RNA.666-201ENST00000516187 112 ntBASIC3.08□□□□□ -1.92
PCDH1Q08174 Y_RNA.714-201ENST00000517065 90 ntBASIC3.08□□□□□ -1.92
PCDH1Q08174 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH1Q08174 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.08□□□□□ -1.92
PCDH1Q08174 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDH1Q08174 MIR622-201ENST00000638396 96 ntBASIC3.08□□□□□ -1.92
PCDH1Q08174 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDH1Q08174 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDH1Q08174 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PCDH1Q08174 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PCDH1Q08174 Y_RNA.99-201ENST00000363138 105 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 SNORA25B-201ENST00000365507 128 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDH1Q08174 RNU6-880P-201ENST00000384526 107 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 RNA5SP323-201ENST00000391094 133 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 Y_RNA.649-201ENST00000459077 103 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 SCGB1D5P-201ENST00000515134 247 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 AL591926.4-201ENST00000616895 298 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PCDH1Q08174 AC008264.2-201ENST00000610193 3731 ntBASIC3.07□□□□□ -1.92
PCDH1Q08174 SNORA33-201ENST00000363664 130 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 RNU6-461P-201ENST00000364195 107 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 SNORD114-6-201ENST00000364393 72 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 RNA5SP125-201ENST00000364843 120 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 RNVU1-14-201ENST00000384770 164 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCDH1Q08174 MIR1289-1-201ENST00000408836 144 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 RN7SKP123-201ENST00000410732 291 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDH1Q08174 SNRPGP13-201ENST00000442212 177 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 MTND5P18-201ENST00000445624 1801 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 ATP5J2P3-201ENST00000451550 258 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 RNU1-131P-201ENST00000458943 161 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 RN7SL636P-201ENST00000497504 294 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDH1Q08174 RNU6-693P-201ENST00000516134 107 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 MIR3616-201ENST00000584070 92 ntBASIC3.06□□□□□ -1.92
PCDH1Q08174 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
PCDH1Q08174 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDH1Q08174 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDH1Q08174 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDH1Q08174 SNORA1B-201ENST00000362535 133 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 SNORA8-201ENST00000384574 139 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 MIR548A1-201ENST00000385041 97 ntBASIC3.05□□□□□ -1.92
PCDH1Q08174 AL117342.1-201ENST00000404861 406 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms