Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
MMP2P08253 MIR4503-201ENST00000582187 83 ntBASIC1.85□□□□□ -2.11
MMP2P08253 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
MMP2P08253 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.85□□□□□ -2.11
MMP2P08253 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
MMP2P08253 AL356292.1-201ENST00000283110 373 ntBASIC1.84□□□□□ -2.11
MMP2P08253 RNU6-112P-201ENST00000363599 104 ntBASIC1.84□□□□□ -2.11
MMP2P08253 RNU6-290P-201ENST00000365212 101 ntBASIC1.84□□□□□ -2.11
MMP2P08253 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.84□□□□□ -2.11
MMP2P08253 RNU6-376P-201ENST00000384731 106 ntBASIC1.84□□□□□ -2.11
MMP2P08253 Y_RNA.569-201ENST00000384749 103 ntBASIC1.84□□□□□ -2.11
MMP2P08253 RNU6-1203P-201ENST00000410703 110 ntBASIC1.84□□□□□ -2.11
MMP2P08253 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.84□□□□□ -2.11
MMP2P08253 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.11
MMP2P08253 RNU6-1337P-201ENST00000516525 95 ntBASIC1.84□□□□□ -2.11
MMP2P08253 RNU6-63P-201ENST00000516690 95 ntBASIC1.84□□□□□ -2.11
MMP2P08253 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.84□□□□□ -2.11
MMP2P08253 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
MMP2P08253 AC073413.2-201ENST00000604332 360 ntBASIC1.84□□□□□ -2.11
MMP2P08253 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.84□□□□□ -2.11
MMP2P08253 AP001282.2-201ENST00000616149 309 ntBASIC1.84□□□□□ -2.11
MMP2P08253 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.84□□□□□ -2.12
MMP2P08253 Y_RNA.452-201ENST00000384202 108 ntBASIC1.83□□□□□ -2.12
MMP2P08253 Y_RNA.518-201ENST00000384552 113 ntBASIC1.83□□□□□ -2.12
MMP2P08253 RNU6-136P-201ENST00000384663 107 ntBASIC1.83□□□□□ -2.12
MMP2P08253 SNORA40.18-201ENST00000391200 128 ntBASIC1.83□□□□□ -2.12
MMP2P08253 MIR1302-3-201ENST00000408128 138 ntBASIC1.83□□□□□ -2.12
MMP2P08253 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
MMP2P08253 RNA5SP100-201ENST00000410903 110 ntBASIC1.83□□□□□ -2.12
MMP2P08253 RNA5SP59-201ENST00000410922 110 ntBASIC1.83□□□□□ -2.12
MMP2P08253 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.83□□□□□ -2.12
MMP2P08253 AC010154.1-201ENST00000425857 269 ntBASIC1.83□□□□□ -2.12
MMP2P08253 AC024067.1-201ENST00000426199 223 ntBASIC1.83□□□□□ -2.12
MMP2P08253 HSPE1P13-201ENST00000451143 297 ntBASIC1.83□□□□□ -2.12
MMP2P08253 TRBVB-201ENST00000477100 408 ntBASIC1.83□□□□□ -2.12
MMP2P08253 RNU6-1278P-201ENST00000516130 107 ntBASIC1.83□□□□□ -2.12
MMP2P08253 Y_RNA.668-201ENST00000516233 93 ntBASIC1.83□□□□□ -2.12
MMP2P08253 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.83□□□□□ -2.12
MMP2P08253 RPL21P9-201ENST00000556149 474 ntBASIC1.83□□□□□ -2.12
MMP2P08253 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.83□□□□□ -2.12
MMP2P08253 MIR4769-201ENST00000584126 77 ntBASIC1.83□□□□□ -2.12
MMP2P08253 MIR3149-201ENST00000584629 83 ntBASIC1.83□□□□□ -2.12
MMP2P08253 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.83□□□□□ -2.12
MMP2P08253 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.83□□□□□ -2.12
MMP2P08253 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
MMP2P08253 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
MMP2P08253 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MMP2P08253 RNU4-80P-201ENST00000363200 141 ntBASIC1.82□□□□□ -2.12
MMP2P08253 Y_RNA.172-201ENST00000363765 102 ntBASIC1.82□□□□□ -2.12
MMP2P08253 Y_RNA.193-201ENST00000363979 102 ntBASIC1.82□□□□□ -2.12
MMP2P08253 RNU6-117P-201ENST00000365415 107 ntBASIC1.82□□□□□ -2.12
MMP2P08253 Y_RNA.418-201ENST00000384029 102 ntBASIC1.82□□□□□ -2.12
MMP2P08253 MIR520A-201ENST00000384862 85 ntBASIC1.82□□□□□ -2.12
MMP2P08253 MIR1289-2-201ENST00000408360 111 ntBASIC1.82□□□□□ -2.12
MMP2P08253 RNU6-855P-201ENST00000410395 104 ntBASIC1.82□□□□□ -2.12
MMP2P08253 RNU6-710P-201ENST00000410424 105 ntBASIC1.82□□□□□ -2.12
MMP2P08253 RNU2-7P-201ENST00000410794 178 ntBASIC1.82□□□□□ -2.12
MMP2P08253 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.82□□□□□ -2.12
MMP2P08253 AC069257.2-201ENST00000441819 155 ntBASIC1.82□□□□□ -2.12
MMP2P08253 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
MMP2P08253 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
MMP2P08253 RPS26P45-201ENST00000471748 340 ntBASIC1.82□□□□□ -2.12
MMP2P08253 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
MMP2P08253 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.82□□□□□ -2.12
MMP2P08253 AC010900.2-201ENST00000604508 210 ntBASIC1.82□□□□□ -2.12
MMP2P08253 AC103810.8-201ENST00000607347 118 ntBASIC1.82□□□□□ -2.12
MMP2P08253 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
MMP2P08253 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MMP2P08253 RNU6-296P-201ENST00000384608 107 ntBASIC1.81□□□□□ -2.12
MMP2P08253 SNORA53-201ENST00000391141 249 ntBASIC1.81□□□□□ -2.12
MMP2P08253 MIR1302-6-201ENST00000408466 90 ntBASIC1.81□□□□□ -2.12
MMP2P08253 Y_RNA.638-201ENST00000459374 113 ntBASIC1.81□□□□□ -2.12
MMP2P08253 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.81□□□□□ -2.12
MMP2P08253 RNU6-1338P-201ENST00000516328 91 ntBASIC1.81□□□□□ -2.12
MMP2P08253 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
MMP2P08253 AC037487.3-201ENST00000606668 112 ntBASIC1.81□□□□□ -2.12
MMP2P08253 U4.1-201ENST00000620349 87 ntBASIC1.81□□□□□ -2.12
MMP2P08253 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
MMP2P08253 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
MMP2P08253 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MMP2P08253 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MMP2P08253 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
MMP2P08253 Y_RNA.136-201ENST00000363444 102 ntBASIC1.8□□□□□ -2.12
MMP2P08253 Y_RNA.237-201ENST00000364439 102 ntBASIC1.8□□□□□ -2.12
MMP2P08253 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
MMP2P08253 RNU6-702P-201ENST00000364982 107 ntBASIC1.8□□□□□ -2.12
MMP2P08253 Y_RNA.341-201ENST00000365341 102 ntBASIC1.8□□□□□ -2.12
MMP2P08253 SNORD116-13-201ENST00000384408 92 ntBASIC1.8□□□□□ -2.12
MMP2P08253 RNA5SP109-201ENST00000391010 116 ntBASIC1.8□□□□□ -2.12
MMP2P08253 RNA5SP511-201ENST00000410487 115 ntBASIC1.8□□□□□ -2.12
MMP2P08253 RNU2-38P-201ENST00000410856 79 ntBASIC1.8□□□□□ -2.12
MMP2P08253 AL606517.2-201ENST00000442855 241 ntBASIC1.8□□□□□ -2.12
MMP2P08253 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.8□□□□□ -2.12
MMP2P08253 SNORA31.17-201ENST00000516953 127 ntBASIC1.8□□□□□ -2.12
MMP2P08253 RNU2-31P-201ENST00000516954 155 ntBASIC1.8□□□□□ -2.12
MMP2P08253 SCARNA24.2-201ENST00000516968 130 ntBASIC1.8□□□□□ -2.12
MMP2P08253 DEFB108E-201ENST00000524692 240 ntBASIC1.8□□□□□ -2.12
MMP2P08253 SNORA63D-201ENST00000364359 132 ntBASIC1.79□□□□□ -2.12
MMP2P08253 RNU6-326P-201ENST00000365480 107 ntBASIC1.79□□□□□ -2.12
MMP2P08253 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms